Doctor of Philosophy, University of California Berkeley (2018)
Bachelor of Science, University of California Berkeley, EECS (2013)
General phase regularized reconstruction using phase cycling
MAGNETIC RESONANCE IN MEDICINE
2018; 80 (1): 112–25
To develop a general phase regularized image reconstruction method, with applications to partial Fourier imaging, water-fat imaging and flow imaging.The problem of enforcing phase constraints in reconstruction was studied under a regularized inverse problem framework. A general phase regularized reconstruction algorithm was proposed to enable various joint reconstruction of partial Fourier imaging, water-fat imaging and flow imaging, along with parallel imaging (PI) and compressed sensing (CS). Since phase regularized reconstruction is inherently non-convex and sensitive to phase wraps in the initial solution, a reconstruction technique, named phase cycling, was proposed to render the overall algorithm invariant to phase wraps. The proposed method was applied to retrospectively under-sampled in vivo datasets and compared with state of the art reconstruction methods.Phase cycling reconstructions showed reduction of artifacts compared to reconstructions without phase cycling and achieved similar performances as state of the art results in partial Fourier, water-fat and divergence-free regularized flow reconstruction. Joint reconstruction of partial Fourier + water-fat imaging + PI + CS, and partial Fourier + divergence-free regularized flow imaging + PI + CS were demonstrated.The proposed phase cycling reconstruction provides an alternative way to perform phase regularized reconstruction, without the need to perform phase unwrapping. It is robust to the choice of initial solutions and encourages the joint reconstruction of phase imaging applications. Magn Reson Med 80:112-125, 2018. © 2017 International Society for Magnetic Resonance in Medicine.
View details for PubMedID 29159989
View details for PubMedCentralID PMC5876131
Robust 4D Flow Denoising Using Divergence-Free Wavelet Transform
MAGNETIC RESONANCE IN MEDICINE
2015; 73 (2): 828-842
To investigate four-dimensional flow denoising using the divergence-free wavelet (DFW) transform and compare its performance with existing techniques.DFW is a vector-wavelet that provides a sparse representation of flow in a generally divergence-free field and can be used to enforce "soft" divergence-free conditions when discretization and partial voluming result in numerical nondivergence-free components. Efficient denoising is achieved by appropriate shrinkage of divergence-free wavelet and nondivergence-free coefficients. SureShrink and cycle spinning are investigated to further improve denoising performance.DFW denoising was compared with existing methods on simulated and phantom data and was shown to yield better noise reduction overall while being robust to segmentation errors. The processing was applied to in vivo data and was demonstrated to improve visualization while preserving quantifications of flow data.DFW denoising of four-dimensional flow data was shown to reduce noise levels in flow data both quantitatively and visually. Magn Reson Med 73:828-842, 2015. © 2014 Wiley Periodicals, Inc.
View details for DOI 10.1002/mrm.25176
View details for Web of Science ID 000348139500043
View details for PubMedID 24549830
View details for PubMedCentralID PMC4139475