School of Humanities and Sciences
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Professor of Particle Physics and Astrophysics and of Physics
BioWhat were the first objects that formed in the Universe? Prof. Abel's group explores the first billion years of cosmic history using ab initio supercomputer calculations. He has shown from first principles that the very first luminous objects are very massive stars and has developed novel numerical algorithms using adaptive-mesh-refinement simulations that capture over 14 orders of magnitude in length and time scales. He currently continues his work on the first stars and first galaxies and their role in chemical enrichment and cosmological reionization. His group studies any of the first objects to form in the universe: first stars, first supernovae, first HII regions, first magnetic fields, first heavy elements, and so on. Most recently he is pioneering novel numerical algorithms to study collisionless fluids such as dark matter which makes up most of the mass in the Universe as well as astrophysical and terrestrial plasmas. He was the director of the Kavli Institute for Particle Astrophysics and Cosmology and Division Director at SLAC 2013-2018.
Professor of Physics and of Particle Physics and Astrophysics
Current Research and Scholarly InterestsObservational astrophysics and cosmology; galaxies, galaxy clusters, dark matter and dark energy; applications of statistical methods; X-ray astronomy; X-ray detector development; optical astronomy; mm-wave astronomy; radio astronomy; gravitational lensing.
David Mulvane Ehrsam and Edward Curtis Franklin Professor in Chemistry, Emeritus
BioProfessor Emeritus Hans C. Andersen applies statistical mechanics to develop theoretical understanding of the structure and dynamics of liquids and new computer simulation methods to aid in these studies.
He was born in 1941 in Brooklyn, New York. He studied chemistry as an undergraduate, then physical chemistry as a doctoral candidate at the Massachusetts Institute of Technology (B.S. 1962, Ph.D. 1966). At MIT he first learned about using a combination of mathematical techniques and the ideas of statistical mechanics to investigate problems of chemical and physical interest. This has been the focus of his research ever since. He joined the Stanford Department of Chemistry as Assistant Professor in 1968, and became Professor of Chemistry in 1980. He was named David Mulvane Ehrsam and Edward Curtis Franklin Professor in Chemistry in 1994. Professor Andersen served as department chairman from 2002 through 2005. Among many honors, his work has been recognized in the Theoretical Chemistry Award and Hildebrand Award in Theoretical and Experimental Chemistry of Liquids from the American Chemical Society, as well as the Dean's Award for Distinguished Teaching and Walter J. Gores Award for Excellence in Teaching at Stanford. He has been elected a member of the National Academy of Sciences, and a fellow of both the American Academy of Arts and Sciences and American Association for the Advancement of Science.
Professor Andersen’s research program has used both traditional statistical mechanical theory and molecular dynamics computer simulation. Early in his career, he was one of the developers of what has come to be known as the Weeks-Chandler-Andersen theory of liquids, which is a way of understanding the structure, thermodynamics, and dynamics of simple dense liquids. Later, he developed several new simulation techniques – now in common use – for exploring the behavior of liquids, such as simulation of a system under constant pressure and/or temperature. He used computer simulations of normal and supercooled liquids to study the temperature dependence of molecular motion in liquids, crystallization in supercooled liquids, and the structure of amorphous solids.
Professor Andersen also developed and analyzed a class of simple lattice models, called facilitated kinetic Ising models, which were then widely used by others to provide insight into the dynamics of real liquids. He simulated simple models of rigid rod polymers to understand the dynamics of this type of material. More recently, in collaboration with Professor Greg Voth of the University of Chicago, he has applied statistical mechanical ideas to the development of coarse grained models of liquids and biomolecules. Such models can be used to simulate molecular systems on long time scales. He has also used mode coupling theory to describe and interpret experiments on rotational relaxation in supercooled liquids and nematogens, in collaboration with Professor Michael Fayer of the Stanford Chemistry Department.
Assistant Professor of Chemistry
BioSteven Banik’s research interests center on rewiring mammalian biology and chemical biotechnology development using molecular design and construction. Projects in the Banik lab combine chemical biology, organic chemistry, protein engineering, cell and molecular biology to precisely manipulate the biological machines present in mammalian cells. Projects broadly aim to perform new functions that shed light on regulatory machinery and the potential scope of mammalian biology. A particular focus is the study of biological mechanisms that can be coopted by synthetic molecules (both small molecules and proteins). These concepts are applied to develop new therapeutic strategies for treating aging-related disorders, genetic diseases, and cancer.
Prior to joining the faculty at Stanford, Steven was a NIH and Burroughs CASI postdoctoral fellow advised by Prof. Carolyn Bertozzi at Stanford. His postdoctoral research developed approaches for targeted protein degradation from the extracellular space with lysosome targeting chimeras (LYTACs). He received his Ph.D. from Harvard University in 2016, where he worked with Prof. Eric Jacobsen on synthetic methods for the selective, catalytic difluorination of organic molecules and new approaches for generating and controlling reactive cationic intermediates in asymmetric catalysis.
K. K. Lee Professor in the School of Engineering, Senior Fellow at the Precourt Institute for Energy and Professor, by courtesy, of Materials Science and Engineering and of Chemistry
BioZhenan Bao joined Stanford University in 2004. She is currently a K.K. Lee Professor in Chemical Engineering, and with courtesy appointments in Chemistry and Material Science and Engineering. She is the Department Chair of Chemical Engineering from 2018. She is a member of the National Academy of Engineering, the American Academy of Arts and Sciences and the National Academy of Inventors. She founded the Stanford Wearable Electronics Initiative (eWEAR) and is the current faculty director. She is also an affiliated faculty member of Precourt Institute, Woods Institute, ChEM-H and Bio-X. Professor Bao received her Ph.D. degree in Chemistry from The University of Chicago in 1995 and joined the Materials Research Department of Bell Labs, Lucent Technologies. She became a Distinguished Member of Technical Staff in 2001. Professor Bao currently has more than 600 refereed publications and more than 65 US patents. She served as a member of Executive Board of Directors for the Materials Research Society and Executive Committee Member for the Polymer Materials Science and Engineering division of the American Chemical Society. She was an Associate Editor for the Royal Society of Chemistry journal Chemical Science, Polymer Reviews and Synthetic Metals. She serves on the international advisory board for Advanced Materials, Advanced Energy Materials, ACS Nano, Accounts of Chemical Reviews, Advanced Functional Materials, Chemistry of Materials, Chemical Communications, Journal of American Chemical Society, Nature Asian Materials, Materials Horizon and Materials Today. She is one of the Founders and currently sits on the Board of Directors of C3 Nano Co. and PyrAmes, both are silicon valley venture funded companies. She is Fellow of AAAS, ACS, MRS, SPIE, ACS POLY and ACS PMSE. She was a recipient of the MRS Mid-Career Award in 2021, ACS Central Science Disruptor and Innovator Prize in 2020, ACS Gibbs Medal in 2020, the Wilhelm Exner Medal from the Austrian Federal Minister of Science in 2018, the L'Oreal UNESCO Women in Science Award North America Laureate in 2017. She was awarded the ACS Applied Polymer Science Award in 2017, ACS Creative Polymer Chemistry Award in 2013 ACS Cope Scholar Award in 2011, and was selected by Phoenix TV, China as 2010 Most influential Chinese in the World-Science and Technology Category. She is a recipient of the Royal Society of Chemistry Beilby Medal and Prize in 2009, IUPAC Creativity in Applied Polymer Science Prize in 2008, American Chemical Society Team Innovation Award 2001, R&D 100 Award, and R&D Magazine Editors Choice Best of the Best new technology for 2001. She has been selected in 2002 by the American Chemical Society Women Chemists Committee as one of the twelve Outstanding Young Woman Scientist who is expected to make a substantial impact in chemistry during this century. She is also selected by MIT Technology Review magazine in 2003 as one of the top 100 young innovators for this century. She has been selected as one of the recipients of Stanford Terman Fellow and has been appointed as the Robert Noyce Faculty Scholar, Finmeccanica Faculty Scholar and David Filo and Jerry Yang Faculty Scholar.
Associate Professor, Biology
Consulting Professor, Biology
Current Research and Scholarly InterestsPlants make new leaves and stems from clusters of undifferentiated cells located at the tips of branches. These cell clusters are called apical meristems. We study transcription factors that control growth and development of apical meristems. Our studies include plants growing in environments rich in water and nutrients as well as in poor environments. The deeper knowledge of plant development gained from these studies will ultimately help increase food security in a changing environment.
Vice Provost for Graduate Education & Postdoctoral Affairs, Jagdeep & Roshni Singh Professor in the School of Engineering, Senior Fellow at Precourt and Professor, by courtesy, of Materials Science & Eng, of Electrical Eng and of Chemistry
BioThe research in the Bent laboratory is focused on understanding and controlling surface and interfacial chemistry and applying this knowledge to a range of problems in semiconductor processing, micro- and nano-electronics, nanotechnology, and sustainable and renewable energy. Much of the research aims to develop a molecular-level understanding in these systems, and hence the group uses of a variety of molecular probes. Systems currently under study in the group include functionalization of semiconductor surfaces, mechanisms and control of atomic layer deposition, molecular layer deposition, nanoscale materials for light absorption, interface engineering in photovoltaics, catalyst and electrocatalyst deposition.
Shirley R. and Leonard W. Ely, Jr. Professor of the School of Humanities and SciencesOn Leave from 01/01/2021 To 06/30/2021
Current Research and Scholarly InterestsWe use genetic, genomic and cell biological approaches to study cell fate acquisition, focusing on cases where cell fate is correlated with asymmetric cell division.
Baker Family Director of Stanford ChEM-H, Anne T. and Robert M. Bass Professor in the School of Humanities and Sciences and Professor, by courtesy, of Chemical and Systems Biology and of Radiology
BioProfessor Carolyn Bertozzi's research interests span the disciplines of chemistry and biology with an emphasis on studies of cell surface sugars important to human health and disease. Her research group profiles changes in cell surface glycosylation associated with cancer, inflammation and bacterial infection, and uses this information to develop new diagnostic and therapeutic approaches, most recently in the area of immuno-oncology.
Dr. Bertozzi completed her undergraduate degree in Chemistry at Harvard University and her Ph.D. at UC Berkeley, focusing on the chemical synthesis of oligosaccharide analogs. During postdoctoral work at UC San Francisco, she studied the activity of endothelial oligosaccharides in promoting cell adhesion at sites of inflammation. She joined the UC Berkeley faculty in 1996. A Howard Hughes Medical Institute Investigator since 2000, she came to Stanford University in June 2015, among the first faculty to join the interdisciplinary institute ChEM-H (Chemistry, Engineering & Medicine for Human Health). She is now the Baker Family Director of Stanford ChEM-H.
Named a MacArthur Fellow in 1999, Dr. Bertozzi has received many awards for her dedication to chemistry, and to training a new generation of scientists fluent in both chemistry and biology. She has been elected to the Institute of Medicine, National Academy of Sciences, and American Academy of Arts and Sciences; and received the Lemelson-MIT Prize, the Heinrich Wieland Prize, the ACS Award in Pure Chemistry, and the Chemistry of the Future Solvay Prize, among others.
The Bertozzi Group develops chemical tools to study the glycobiology underlying diseases such as cancer, inflammation, tuberculosis and most recently COVID-19. She is the inventor of "bioorthogonal chemistry", a class of chemical reactions compatible with living systems that enable molecular imaging and drug targeting. Her group also developed new therapeutic modalities for targeted degradation of extracellular biomolecules, such as antibody-enzyme conjugates and Lysosome Targeting Chimeras (LYTACs). As well, her group studies NGly1 deficiency, a rare genetic disease characterized by loss of the human N-glycanase.
Several of the technologies developed in the Bertozzi lab have been adapted for commercial use. Actively engaged with several biotechnology start-ups, Dr. Bertozzi cofounded Redwood Bioscience, Enable Biosciences, Palleon Pharmaceuticals, InterVenn Bio, OliLux Bio, Grace Science LLC and Lycia Therapeutics. She is also a member of the Board of Directors of Lilly.
Charles and Elizabeth Prothro Professor in Marine Sciences
Current Research and Scholarly InterestsThermal physiology, open ocean predators, ecological physiology and tuna biology
Steven M. Block
The Stanford W. Ascherman, M.D., Professor and Professor of Applied Physics and of BiologyOn Leave from 09/01/2020 To 08/31/2021
Current Research and Scholarly InterestsSingle molecule biophysics using optical trapping and fluorescence
Bing Director in Human Biology, Emerita
Current Research and Scholarly InterestsI am interested in how environmental variation affects life history traits, population structure and dynamics, and species interactions in ecological and evolutionary time, using Lepidoptera.
Camille Dreyfus Professor of Chemistry
Current Research and Scholarly InterestsPlease visit my website for complete information:
J.G. Jackson and C.J. Wood Professor of Chemistry, Emeritus
BioJohn Brauman’s research has advanced the understanding of the factors that determine the rates and products of chemical reactions. His primary areas of effort have involved the spectroscopy, photochemistry, reaction dynamics, and reaction mechanisms of gas-phase ions.
John I. Brauman was born in Pittsburgh, PA in 1937. He attended the Massachusetts Institute of Technology (S.B. 1959) and the University of California at Berkeley (Ph.D. 1963). Following a National Science Foundation Postdoctoral Fellowship at the University of California, Los Angeles, he accepted a position at Stanford University where he is now J. G. Jackson - C. J. Wood Professor of Chemistry Emeritus, and serves as Associate Dean of Research. He was previously Department Chair and Associate Dean for Natural Sciences.
Brauman’s work has been recognized in the National Medal of Science, National Academy of Sciences Award in Chemical Sciences, Linus Pauling Medal, Dean's Award for Distinguished Teaching from Stanford University, among many other honors. He is a member of the National Academy of Sciences, American Academy of Arts and Sciences, American Philosophical Society, a Fellow of the American Association for the Advancement of Science, Fellow of the American Chemical Society, and Honorary Fellow of the California Academy of Sciences. He received the 2017 ACS Parsons Award in recognition of his service to public science communication and policy, which includes roles as Deputy Editor for Physical Sciences and Editorial Board Chair for Science magazine, and Home Secretary of the National Academy of Sciences.
Research in the Brauman Group centered on structure and reactivity. Brauman has studied ionic reactions in the gas phase, including acid-base chemistry, the mechanisms of proton transfers, nucleophilic displacement, and addition-elimination reactions. His work has explored the shape of the potential surfaces and the dynamics of reactions on these surfaces. He has made contributions to the field of electron photodetachment spectroscopy of negative ions, measurements of electron affinities, the study of dipole-supported electronic states, and multiple photon infrared activation of ions. He has also studied mechanisms of solution and gas phase organic reactions as well as organometallic reactions and the behavior of biomimetic organometallic species.
BioDr. Megan Brennan's interests include the development of organic chemistry lab courses that give students hands-on opportunities to explore chemistry while reinforcing and building upon concepts learned in lecture classes. She aims for her labs to bring chemistry to life, and to afford students a chance to have fun and experience a taste of scientific discovery.
While studying chemistry at Lafayette College (B.S. 2002), Dr. Brennan worked on the preparation of triazaphenanthrenes and the Oxa–Pictet–Spengler reaction of 1-(3-furyl)alkan-2-ols. She completed her doctoral work at Stanford (Ph.D. 2008), conducting her thesis research in palladium asymmetric allylic alkylation under the advisement of Professor Barry Trost. During her postdoctoral research with Professor Scott Miller at Yale University, she investigated the use of peptides containing a thiazole side chain for use in acyl anion chemistry. She joined the teaching staff at University of California, Berkeley in 2010 before coming returning to Stanford in 2011 to spearhead the development of a new summer organic chemistry sequence, a comprehensive course designed for pre-meds, offering an entire year of organic chemistry in nine weeks.
Dr. Brennan also acts as the liaison to the chemistry majors, to promote events with faculty in both the academic and social aspect: providing an environment that allows students to be comfortable and able to learn, while helping them take advantage of every opportunity that Stanford offers.
Dr. Brennan's current research is in the development classroom experiments that bring cutting edge industrial and academic research into the undergraduate laboratory experience.
Marguerite Blake Wilbur Professor in Natural Science and Professor of Photon Science, of Applied Physics, of Physics and Director, Stanford PULSE Institute
BioPhil Bucksbaum holds the Marguerite Blake Wilbur Chair in Natural Science at Stanford University, with appointments in Physics, Applied Physics, and in Photon Science at SLAC. He conducts his research in the Stanford PULSE Institute (https://web.stanford.edu/~phbuck). He and his wife Roberta Morris live in Menlo Park, California with their cat. Their grown daughter lives in Toronto.
Bucksbaum was born and raised in Iowa, and graduated from Harvard in 1975. He attended U.C. Berkeley on a National Science Foundation Graduate Fellowship and received his Ph.D. in 1980 for atomic parity violation experiments under Professor Eugene Commins, with whom he also has co-authored a textbook, “Weak Interactions of Leptons and Quarks.” In 1981 he joined Bell Laboratories, where he pursued new applications of ultrafast coherent radiation from terahertz to vacuum ultraviolet, including time-resolved VUV ARPES, and strong-field laser-atom physics.
He joined the University of Michigan in 1990 and stayed for sixteen years, becoming Otto Laporte Collegiate Professor and then Peter Franken University Professor. He was founding Director of FOCUS, a National Science Foundation Physics Frontier Center, where he pioneered research using ultrafast lasers to control quantum systems. He also launched the first experiments in ultrafast x-ray science at the Advanced Photon Source at Argonne National Lab. In 2006 Bucksbaum moved to Stanford and SLAC, and organized the PULSE Institute to develop research utilizing the world’s first hard x-ray free-electron laser, LCLS. In addition to directing PULSE, he has previously served as Department Chair of Photon Science and Division Director for Chemical Science at SLAC. His current research is in laser interrogation of atoms and molecules to explore and image structure and dynamics on the femtosecond scale. He currently has more than 250 publications.
Bucksbaum is a Fellow of the APS and the Optical Society, and has been elected to the National Academy of Sciences and the American Academy of Arts and Sciences. He has held Guggenheim and Miller Fellowships, and received the Norman F. Ramsey Prize of the American Physical Society for his work in ultrafast and strong-field atomic and molecular physics. He served as the Optical Society President in 2014, and also served as the President of the American Physical Society in 2020. He has led or participated in many professional service activities, including NAS studies, national and international boards, initiatives, lectureships and editorships.
The Gabilan Professor
Current Research and Scholarly InterestsObservational cosmology. Dark energy. Weak gravitational lensing.
Preparing for science with the Large Synoptic Survey Telescope (LSST).
Member of the LSST Dark Energy Science Collaboration.
Associate Professor of Chemistry
Current Research and Scholarly InterestsResearch in our group explores the boundaries of modern organic synthesis to enable the more rapid creation of the highest molecular complexity in a predictable and controllable fashion. We are particularly inspired by natural products not only because of their importance as synthetic targets but also due to their ability to serve as invaluable identifiers of unanswered scientific questions.
One major focus of our research is selective halogenation of organic molecules. Dihalogenation and halofunctionalization encompass some of the most fundamental transformations in our field, yet methods capable of accessing relevant halogenated motifs in a chemo-, regio-, and enantioselective fashion are lacking.
We are also interested in the practical total synthesis of natural products for which there is true impetus for their construction due to unanswered chemical, medicinal, biological, or biophysical questions. We are specifically engaged in the construction of unusual lipids with unanswered questions regarding their physical properties and for which synthesis offers a unique opportunity for study.
The William R. Kenan, Jr. Professor and Professor of Photon Science
BioRobert L. Byer has served as President of The American Physical Society, of the Optical Society of America and of the IEEE LEOS. He has served as Vice Provost and Dean of Research at Stanford. He has been Chair of the Department of Applied Physics, Director of the Edward L. Ginzton Laboratory and Director of the Hansen Experimental Physics Laboratory. He is a founding member of the California Council on Science and Technology and served as Chair from 1995-1999. He was a member of the Air Force Scientific Advisory Board from 2002-2006 and has been a member of the National Ignition Facility since 2000.
Robert L. Byer has conducted research and taught classes in lasers and nonlinear optics at Stanford University since 1969. He has made extraordinary contributions to laser science and technology including the demonstration of the first tunable visible parametric oscillator, the development of the Q-switched unstable resonator Nd:YAG laser, remote sensing using tunable infrared sources and precision spectroscopy using Coherent Anti Stokes Raman Scattering (CARS). Current research includes precision laser measurements in support of the detection of gravitational waves and laser “Accelerator on a chip”.
Stanley G. Wojcicki Professor
BioFor five years up to mid-2015 has been Spokesperson for the SuperCDMS (Cryogenic Dark Matter Search) collaboration with twenty-two member institutions, which mounted a series of experiments in the Soudan mine in northern Minnesota to search for the dark matter in the form of weakly interacting massive particles or WIMPs. This direct detection effort has lead the world in sensitivity for much of the past ten years and utilizes novel cryogenic detectors using germanium and silicon crystals operated below 0.1 K. The completed CDMS II experiment operated 4 kg of germanium and 1 kg of silicon for two years and set the most sensitive limits at the time for spin-independent interactions for WIMPs masses above 40 GeV/c2. The SuperCDMS Soudan experiment operated 9 kg of germanium until the end of calendar 2015.
He was selected for a three-term as Project Director, through mid 2018, for the approved second generation (G2) SuperCDMS SNOLAB experiment which will operate 30 kg of Ge and Si detectors in the deeper SNOLAB facility in Canada. The project searches for low mass WIMPs (0.1 - 10 GeV/c2) and the cryostat facility will allow future upgrades to search down to the solar neutrino floor. It has recently been approved for full construction by the DOE and NSF.
Barnum-Simons Chair in Math and Statistics, and Professor of Statistics and, by courtesy, of Electrical Engineering
BioEmmanuel Candès is the Barnum-Simons Chair in Mathematics and Statistics, a professor of electrical engineering (by courtesy) and a member of the Institute of Computational and Mathematical Engineering at Stanford University. Earlier, Candès was the Ronald and Maxine Linde Professor of Applied and Computational Mathematics at the California Institute of Technology. His research interests are in computational harmonic analysis, statistics, information theory, signal processing and mathematical optimization with applications to the imaging sciences, scientific computing and inverse problems. He received his Ph.D. in statistics from Stanford University in 1998.
Candès has received several awards including the Alan T. Waterman Award from NSF, which is the highest honor bestowed by the National Science Foundation, and which recognizes the achievements of early-career scientists. He has given over 60 plenary lectures at major international conferences, not only in mathematics and statistics but in many other areas as well including biomedical imaging and solid-state physics. He was elected to the National Academy of Sciences and to the American Academy of Arts and Sciences in 2014.
Ann and Bill Swindells Professor, Emeritus
BioDr. Carlsson has been a professor of mathematics at Stanford University since 1991. In the last ten years, he has been involved in adapting topological techniques to data analysis, under NSF funding and as the lead PI on the DARPA “Topological Data Analysis” project from 2005 to 2010. He is the lead organizer of the ATMCS conferences, and serves as an editor of several Mathematics journals
Associate Professor of Chemistry and, by courtesy, of Chemical Engineering
Current Research and Scholarly InterestsOur research program integrates chemistry, biology, and physics to investigate the assembly and function of macromolecular and whole-cell systems. The genomics and proteomics revolutions have been enormously successful in generating crucial "parts lists" for biological systems. Yet, for many fascinating systems, formidable challenges exist in building complete descriptions of how the parts function and assemble into macromolecular complexes and whole-cell factories. We are inspired by the need for new and unconventional approaches to solve these outstanding problems and to drive the discovery of new therapeutics for human disease.
Our approach is different from the more conventional protein-structure determinations of structural biology. We employ biophysical and biochemical tools, and are designing new strategies using solid-state NMR spectroscopy to examine assemblies such as amyloid fibers, bacterial cell walls, whole cells, and biofilms. We would like to understand at a molecular and atomic level how bacteria self-assemble extracellular structures, including functional amyloid fibers termed curli, and how bacteria use such building blocks to construct organized biofilm architectures. We also employ a chemical genetics approach to recruit small molecules as tools to interrupt and interrogate the temporal and spatial events during assembly processes and to develop new strategies to prevent and treat infectious diseases. Overall, our approach is multi-pronged and provides training opportunities for students interested in research at the chemistry-biology interface.
James K. Chen
Jauch Professor and Professor of Chemical and Systems Biology, of Developmental Biology and of Chemistry
Current Research and Scholarly InterestsOur laboratory combines chemistry and developmental biology to investigate the molecular events that regulate embryonic patterning, tissue regeneration, and tumorigenesis. We are currently using genetic and small-molecule approaches to study the molecular mechanisms of Hedgehog signaling, and we are developing chemical technologies to perturb and observe the genetic programs that underlie vertebrate development.
Associate Professor of Biology
Current Research and Scholarly InterestsOur goal is to understand how brain circuits mediate motivated behaviors and how maladaptive changes in these circuits cause mood disorders. To achieve this goal, we focus on studying the neural circuits for pain and addiction, as both trigger highly motivated behaviors, whereas, transitioning from acute to chronic pain or from recreational to compulsive drug use involves maladaptive changes of the underlying neuronal circuitry.
Associate Professor of Chemistry, Emeritus
Current Research and Scholarly InterestsThe Chidsey group research interest is to build the chemical base for molecular electronics. To accomplish this, we synthesize the molecular and nanoscopic systems, build the analytical tools and develop the theoretical understanding with which to study electron transfer between electrodes and among redox species through insulating molecular bridges
William R. Kenan Jr. Professor and Professor of Molecular and Cellular Physiology
Current Research and Scholarly InterestsSynthesis, functionalization and applications of nanoparticle bioprobes for molecular cellular in vivo imaging in biology and biomedicine. Linear and nonlinear difference frequency mixing ultrasound imaging. Lithium metal-sulfur batteries, new approaches to electrochemical splitting of water. CO2 reduction, lithium extraction from salt water
Vice Provost for Undergraduate Education, Freeman-Thornton Chair for the Vice Provost for Undergraduate Education and Professor of Physics
Current Research and Scholarly InterestsExperimental & Observational Astrophysics and Cosmology
George A. and Hilda M. Daubert Professor of Chemistry, Emeritus
BioProfessor Emeritus James Collman has made landmark contributions to inorganic chemistry, metal ion biochemistry, homogeneous catalysis, and transition metal organometallic chemistry. He pioneered numerous now-popular research tools to reveal key structural and functional details of metalloenzymes essential to respiration and energy, and hemoglobin and myoglobin, essential to oxygen transport in the blood.
Born 1932 in Beatrice, Nebraska, James P. Collman studied chemistry at U. Nebraska–Lincoln (B.S. 1954, M.S. 1956). His doctoral work at U. Illinois at Urbana-Champaign (Ph.D., 1958) focused on Grignard reagents. As a faculty member at U. North Carolina, he demonstrated aromatic reactivity in metal acetylacetonates, and he developed metal complexes that hydrolyze peptide bonds under physiological conditions. He came to Stanford University as Professor of Chemistry in 1967. Among many honors, Prof. Collman’s was elected to the National academy of Sciences in 1975, and named California Scientist of the Year in 1983.
At Stanford, Prof. Collman invented a new paradigm for studying biological systems using functional synthetic analogs of metal-containing enzyme systems, free from the protein coatings that can affect metalloprotein chemical properties. This strategy allowed him to elucidate the intrinsic reactivity of the metal center as well as the effects of protein-metal interactions on biological function.
One focal point of this research has involved heme-proteins such as the oxygen (O2) carrier hemoglobin (Hb), and the O2-storing protein myoglobin (Mb). Prof. Collman was the first to prepare and characterize stable, functional analogues of the Hb and Mb active sites, which contain an iron derivative of the large flat “porphyrin” ligand. In his “picket fence” porphyrin, groups installed on the periphery block side reactions, which would otherwise degrade the structure. This protected iron complex manifests the unique magnetic, spectroscopic and structural characteristics of the O2-binding Hb and Mb sites, and exhibits very similar O2-binding affinities.
The Collman Group also prepared functional mimics of the O2-binding/reducing site in a key respiration enzyme, cytochrome c oxidase, CcO, which converts O2 to H2O during biosynthesis of the energy storage molecule ATP. This enzyme must be very selective: partial O2 reduction products are toxic. Prof. Collman invented a powerful synthetic strategy to create analogs of the CcO active site and applied novel electrochemical techniques to demonstrate that these models catalyze the reduction of O2 to water without producing toxic partially-reduced species. He was able to mimic slow, rate-limiting electron delivery by attaching his CcO model to a liquid-crystalline membrane using “click chemistry.” He demonstrated that hydrogen sulfide molecules and heterocycles reversibly bind to the metal centers at CcO’s active site, connecting a synthetic enzyme model to simple molecules that reversibly inhibit respiration. These respiration inhibitors exhibit physiological properties, affecting blood clotting and controlling the effects of the hormone, nitric oxide, NO.
In addition, Prof. Collman performed fundamental studies of organometallic reactions. He also prepared and characterized homodinuclear and heterodinuclear complexes having metal-metal multiple bonds, and made the first measurements of the rotational barriers found in multiple metal-metal bonds.
Prof. Collman’s impactful textbook “Principles and Applications of Organotransition Metal Chemistry” has seen multiple editions. His book “Naturally Dangerous: Surprising Facts About Food, Health, and the Environment” explains the science behind everyday life, and received favorable reviews in Nature and The Washington Post.
BioDr. Charlie Cox’s primary interests lie in the field of chemical education, and in bringing cutting-edge science into the undergraduate classroom. He focuses on methods to promote active learning in organic and general chemistry, targeting improvements in problem solving, critical thinking and retention.
Charlie was born in North Carolina. He took a strong interest in chemistry beginning in high school. As an undergraduate at North Carolina State U. (B.S. 2001) he explored research in biophysical chemistry, analyzing proteins with differential scanning calorimetry, and participated on a chemical education project focused on SCALE-Up curricula. His doctoral study at Clemson U. (Ph.D. 2006) required two projects—one chemistry-based and another education-oriented. He completed the first in a physical organic research group analyzing fullerenes and porphyrins. For the latter, he worked with Dr. Melanie Cooper, developing interventions in general and organic chemistry and evidence-models to support curricular reform. He also collaborated with Dr. Ron Stevens, applying IMMEX software for assessment of chemistry learning and problem solving (www.immex.com). Dr. Cox’s postdoctoral work in chemical education at the University of New Hampshire further motivated him to seek a career in teaching. He has taught general, inorganic, advanced organic, and analytical chemistry, as well as teaching methodology. He joined the Stanford Department of Chemistry in 2010, and is currently Lecturer of Chemistry and Coordinator for T.A. Teaching and Safety Training.
Teaching and Research
Dr. Cox teaches undergraduate organic, analytical and biochemistry. His research and course development emphasize techniques to promote active learning, including the use of flipped classrooms and case studies to improve learning and retention.
Active Learning: Dr. Cox is actively designing and applying course frameworks that include a cyclic “group-individual-group” approach: In section, students work in groups to solve problems, and develop critical thinking by analyzing case-studies. This work is reinforced by an individual homework assignment, which is discussed in groups during the following lecture. Dr. Cox is implementing this approach in general, organic, and biochemistry courses to provide a learning structure in which students can actively work together yet still obtain individual attention.
Flipped Classrooms: As part of active learning methods, Dr. Cox is developing best practices for implementing a flipped classroom paradigm in biochemistry. In this approach, lectures focus predominantly on group discussion with clicker questions designed to further facilitate understanding.
Case Studies: Dr. Cox is developing case studies for general, organic, and bio-chemistry, as well as evidence-based methods to assess their effectiveness in promoting problem solving, critical thinking and long-term retention.
Dr. Cox serves as a pre-major advisor for freshman and sophomores, helping students with course selection, internship planning, and options for study abroad and research experience. He also serves as a chemistry major advisor and the chapter advisor for the social chemistry fraternity Alpha Chi Sigma.
TA & Safety Training
Dr. Cox coordinates teaching assistant and departmental safety training. This three-day event covers teaching practices, safety and university policies. In this role, Dr. Cox has developed hands-on safety training modules for graduate students and an online interactive safety training module for undergraduate students, which has disseminated at national meeting of the American Chemical Society.
Leland Scholar Program
Dr. Cox co-instructs the science portion in the Leland Scholars Programs for incoming freshmen with Dr. Jennifer Schwartz Poehlmann. The program provides a discussion of chemistry in the context of important considerations such as drug design, pollution and energy.
Assistant Professor of Biology
BioJonas Cremer is an Assistant Professor in Biology. He is interested in the physiology and growth of prokaryotes. Jonas studied physics and biophysics in Munich. He was a postdoctoral research at the University of California, San Diego. Before joining Stanford, he was an Assistant Professor at the University of Groningen. His current research considers various scales of prokaryotic life (from the coordination of fundamental processes within cells to the collective behavior of cells in specific ecological settings), with a focus on gut bacteria and the model organism Escherichia coli.
Edward Ricketts Provostial Professor and Senior Fellow at the Woods Institute for the EnvironmentOn Leave from 01/01/2021 To 06/30/2021 I am on sabbatical January-June 2021 and will be responding primarily to close collaborators
Current Research and Scholarly InterestsEcology, conservation, fisheries, protected species, ecosystem-based management
Job and Gertrud Tamaki Professor of Chemistry
Current Research and Scholarly InterestsWe are developing various physical and chemical approaches to study biological processes in neurons. There are three major research directions: (1) Investigating the axonal transport process using optical imging, magnetic and optical trapping, and microfluidic platform; (2) Developing vertical nanopillar-based electric and optic sensors for sensitive detection of biological functions; (3) Using optogentic approach to investigate temporal and spatial control of intracellular signaling pathways.
Director, Precourt Institute for Energy, Professor of Materials Science and Engineering, of Photon Science, Senior Fellow at the Precourt Institute for Energy and Professor, by courtesy, of Chemistry
BioCui studies fundamentals and applications of nanomaterials and develops tools for their understanding. Research Interests: nanotechnology, batteries, electrocatalysis, wearables, 2D materials, environmental technology (water, air, soil), cryogenic electron microscopy.
Martha S. Cyert
Dr. Nancy Chang Professor
Current Research and Scholarly InterestsThe Cyert lab is identifying signaling networks for calcineurin, the conserved Ca2+/calmodulin-dependent phosphatase, and target of immunosuppressants FK506 and cyclosporin A, in yeast and mammals. Cell biological investigations of target dephosphorylation reveal calcineurin’s many physiological functions. Roles for short linear peptide motifs, or SLiMs, in substrate recognition, network evolution, and regulation of calcineurin activity are being studied.
The J.G. Jackson and C.J. Wood Professor in Chemistry
BioProfessor Dai’s research spans chemistry, physics, and materials and biomedical sciences, leading to materials with properties useful in electronics, energy storage and biomedicine. Recent developments include near-infrared-II fluorescence imaging, ultra-sensitive diagnostic assays, a fast-charging aluminum battery and inexpensive electrocatalysts that split water into oxygen and hydrogen fuels.
Born in 1966 in Shaoyang, China, Hongjie Dai began his formal studies in physics at Tsinghua U. (B.S. 1989) and applied sciences at Columbia U. (M.S. 1991). He obtained his Ph.D. from Harvard U and performed postdoctoral research with Dr. Richard Smalley. He joined the Stanford faculty in 1997, and in 2007 was named Jackson–Wood Professor of Chemistry. Among many awards, he has been recognized with the ACS Pure Chemistry Award, APS McGroddy Prize for New Materials, Julius Springer Prize for Applied Physics and Materials Research Society Mid-Career Award. He has been elected to the American Academy of Arts and Sciences, National Academy of Sciences (NAS), National Academy of Medicine (NAM) and Foreign Member of Chinese Academy of Sciences.
The Dai Laboratory has advanced the synthesis and basic understanding of carbon nanomaterials and applications in nanoelectronics, nanomedicine, energy storage and electrocatalysis.
The Dai Lab pioneered some of the now-widespread uses of chemical vapor deposition for carbon nanotube (CNT) growth, including vertically aligned nanotubes and patterned growth of single-walled CNTs on wafer substrates, facilitating fundamental studies of their intrinsic properties. The group developed the synthesis of graphene nanoribbons, and of nanocrystals and nanoparticles on CNTs and graphene with controlled degrees of oxidation, producing a class of strongly coupled hybrid materials with advanced properties for electrochemistry, electrocatalysis and photocatalysis. The lab’s synthesis of a novel plasmonic gold film has enhanced near-infrared fluorescence up to 100-fold, enabling ultra-sensitive assays of disease biomarkers.
Nanoscale Physics and Electronics
High quality nanotubes from his group’s synthesis are widely used to investigate the electrical, mechanical, optical, electro-mechanical and thermal properties of quasi-one-dimensional systems. Lab members have studied ballistic electron transport in nanotubes and demonstrated nanotube-based nanosensors, Pd ohmic contacts and ballistic field effect transistors with integrated high-kappa dielectrics.
Nanomedicine and NIR-II Imaging
Advancing biological research with CNTs and nano-graphene, group members have developed π–π stacking non-covalent functionalization chemistry, molecular cellular delivery (drugs, proteins and siRNA), in vivo anti-cancer drug delivery and in vivo photothermal ablation of cancer. Using nanotubes as novel contrast agents, lab collaborations have developed in vitro and in vivo Raman, photoacoustic and fluorescence imaging. Lab members have exploited the physics of reduced light scattering in the near-infrared-II (1000-1700nm) window and pioneered NIR-II fluorescence imaging to increase tissue penetration depth in vivo. Video-rate NIR-II imaging can measure blood flow in single vessels in real time. The lab has developed novel NIR-II fluorescence agents, including CNTs, quantum dots, conjugated polymers and small organic dyes with promise for clinical translation.
Electrocatalysis and Batteries
The Dai group’s nanocarbon–inorganic particle hybrid materials have opened new directions in energy research. Advances include electrocatalysts for oxygen reduction and water splitting catalysts including NiFe layered-double-hydroxide for oxygen evolution. Recently, the group also demonstrated an aluminum ion battery with graphite cathodes and ionic liquid electrolytes, a substantial breakthrough in battery science.
Gretchen C. Daily
Bing Professor in Environmental Science and Senior Fellow at the Woods Institute for the Environment
Current Research and Scholarly InterestsLand use, biodiversity dynamics, ecosystem services
Laura M.K. Dassama
Assistant Professor of Chemistry
BioThe Dassama laboratory at Stanford performs research directed at understanding and mitigating bacterial multidrug resistance (MDR). Described as an emerging crisis, MDR often results from the misuse of antibiotics and the genetic transfer of resistance mechanisms by microbes. Efforts to combat MDR involve two broad strategies: understanding how resistance is acquired in hopes of mitigating it, and identifying new compounds that could serve as potent antibiotics. The successful implementation of both strategies relies heavily on an interdisciplinary approach, as resistance mechanisms must be elucidated on a molecular level, and formation of new drugs must be developed with precision before they can be used. The laboratory uses both strategies to contribute to current MDR mitigation efforts.
One area of research involves integral membrane proteins called multidrug and toxin efflux (MATE) pumps that have emerged as key players in MDR because their presence enables bacteria to secrete multiple drugs.The genes encoding these proteins are present in many bacterial genomes. However, the broad substrate range and challenges associated with membrane protein handling have hindered efforts to elucidate and exploit transport mechanisms of MATE proteins. To date, substrates identified for MATE proteins are small and ionic drugs, but recent reports have implicated these proteins in efflux of novel natural product substrates. The group’s approach will focus on identifying the natural product substrates of some of these new MATE proteins, as well as obtaining static and dynamic structures of the proteins during efflux. These efforts will define the range of molecules that can be recognized and effluxed by MATE proteins and reveal how their transport mechanisms can be exploited to curtail drug efflux.
Another research direction involves the biosynthesis of biologically active natural products. Natural products are known for their therapeutic potential, and those that derive from modified ribosomal peptides are an important emerging class. These ribosomally produced and post-translationally modified peptidic (RiPP) natural products have the potential to substantially diversify the chemical composition of known molecules because the peptides they derive from can tolerate sequence variance, and modifying enzymes can be selected to install specific functional groups. With an interest in producing new antimicrobial and anticancer compounds, the laboratory will exploit the versatility of RiPP natural product biosynthesis. Specifically, efforts in the laboratory will revolve around elucidating the reaction mechanisms of particular biosynthetic enzymes and leveraging that understanding to design and engineer new natural products with desired biological activities.
Giulio De Leo
Professor of Biology and Senior Fellow at the Woods Institute for the Environment
Current Research and Scholarly InterestsI am a theoretical ecologist mostly interested in investigating factors and processes driving the dynamics of natural and harvested populations and on how to use this knowledge to inform practical management. I have worked broadly on life histories analysis, fishery management, dynamics and control of infectious diseases and environmental impact assessment.
John B. and Jean De Nault Professor of Marine Sciences
Current Research and Scholarly InterestsBiomechanics, ecology, and ecological physiology
Joseph M. DeSimone
Sanjiv Sam Gambhir Professor of Translational Medicine, Professor of Chemical Engineering and, by courtesy, of Chemistry and of Operations, Information and Technology at the Graduate School of Business
BioJoseph M. DeSimone is the Sanjiv Sam Gambhir Professor of Translational Medicine and Chemical Engineering at Stanford University. He holds appointments in the Departments of Radiology and Chemical Engineering with courtesy appointments in the Department of Chemistry and in Stanford’s Graduate School of Business.
The DeSimone laboratory's research efforts are focused on developing innovative, interdisciplinary solutions to complex problems centered around advanced polymer 3D fabrication methods. In Chemical Engineering and Materials Science, the lab is pursuing new capabilities in digital 3D printing, as well as the synthesis of new polymers for use in advanced additive technologies. In Translational Medicine, research is focused on exploiting 3D digital fabrication tools to engineer new vaccine platforms, enhanced drug delivery approaches, and improved medical devices for numerous conditions, with a current major focus in pediatrics. Complementing these research areas, the DeSimone group has a third focus in Entrepreneurship, Digital Transformation, and Manufacturing.
Before joining Stanford in 2020, DeSimone was a professor of chemistry at the University of North Carolina at Chapel Hill and of chemical engineering at North Carolina State University. He is also Co-founder, Board Chair, and former CEO (2014 - 2019) of the additive manufacturing company, Carbon. DeSimone is responsible for numerous breakthroughs in his career in areas including green chemistry, medical devices, nanomedicine, and 3D printing. He has published over 350 scientific articles and is a named inventor on over 200 issued patents. Additionally, he has mentored 80 students through Ph.D. completion in his career, half of whom are women and members of underrepresented groups in STEM.
In 2016 DeSimone was recognized by President Barack Obama with the National Medal of Technology and Innovation, the highest U.S. honor for achievement and leadership in advancing technological progress. He has received numerous other major awards in his career, including the U.S. Presidential Green Chemistry Challenge Award (1997); the American Chemical Society Award for Creative Invention (2005); the Lemelson-MIT Prize (2008); the NIH Director’s Pioneer Award (2009); the AAAS Mentor Award (2010); the Heinz Award for Technology, the Economy and Employment (2017); the Wilhelm Exner Medal (2019); the EY Entrepreneur of the Year Award (2019 U.S. Overall National Winner); and the Harvey Prize in Science and Technology (2020). He is one of only 25 individuals elected to all three branches of the U.S. National Academies (Sciences, Medicine, Engineering). DeSimone received his B.S. in Chemistry in 1986 from Ursinus College and his Ph.D. in Chemistry in 1990 from Virginia Tech.
Mary V. Sunseri Professor and Professor of Mathematics
Current Research and Scholarly InterestsResearch Interests:
Hamamoto Family Professor
BioWhat is the origin of mass? Are there other universes with different physical laws?
Professor Dimopoulos has been searching for answers to some of the deepest mysteries of nature. Why is gravity so weak? Do elementary particles have substructure? What is the origin of mass? Are there new dimensions? Can we produce black holes in the lab?
Elementary particle physics is entering a spectacular new era in which experiments at the Large Hadron Collider at CERN will soon shed light on such questions and lead to a new deeper theory of particle physics, replacing the Standard Model proposed forty years ago. The two leading candidates for new theories are the Supersymmetric Standard Model and theories with Large Extra Dimensions, both proposed by Professor Dimopoulos and collaborators.
Professor Dimopoulos is collaborating on a number of experiments that use the dramatic advances in atom interferometry to do fundamental physics. These include testing Einstein’s theory of general relativity to fifteen decimal precision, atom neutrality to thirty decimals, and looking for modifications of quantum mechanics. He is also designing an atom-interferometric gravity-wave detector that will allow us to look at the universe with gravity waves instead of light, marking the dawn of gravity wave astronomy and cosmology.
Jose R. Dinneny
Associate Professor of Biology
Current Research and Scholarly InterestsThe biology of root systems is governed by both micro-scale and systemic signaling that allows the plant to integrate these complex variables into growth and branching decisions that ultimately determine the efficiency resources are captured. Research in my lab is aimed at understanding the response of roots to water-limiting conditions and is exploring this process at different organizational scales from the individual cell type to the level of the whole plant.
Bing Prof in Environmental Science and Senior Fellow at the Woods Institute for the Environment
Current Research and Scholarly InterestsEcological and evolutionary aspects of plant-animal interactions, largely but not exclusively, in tropical forest ecosystems.
Conservation biology in tropical ecosystems.
Studies on biodiversity.
Education, at all levels, on scientific practice, ecology and biodiversity conservation.
Associate Professor of Biology
Current Research and Scholarly InterestsMy lab is interested in the relationship between cell death and metabolism. Using techniques drawn from many disciplines my laboratory is investigating how perturbation of intracellular metabolic networks can result in novel forms of cell death, such as ferroptosis. We are interested in applying this knowledge to find new ways to treat diseases characterized by insufficient (e.g. cancer) or excessive (e.g. neurodegeneration) cell death.
Professor of Applied Physics and of Physics, Emeritus
Current Research and Scholarly InterestsStudy of changes in conformation of proteins and RNA using x-ray scattering
Anne T. and Robert M. Bass Professor in the School of Humanities and SciencesOn Leave from 10/01/2020 To 06/30/2021
BioDavid Donoho is a mathematician who has made fundamental contributions to theoretical and computational statistics, as well as to signal processing and harmonic analysis. His algorithms have contributed significantly to our understanding of the maximum entropy principle, of the structure of robust procedures, and of sparse data description.
My theoretical research interests have focused on the mathematics of statistical inference and on theoretical questions arising in applying harmonic analysis to various applied problems. My applied research interests have ranged from data visualization to various problems in scientific signal processing, image processing, and inverse problems.
Provost, James and Anna Marie Spilker Professor and Professor in the School of Engineering, Professor of Materials Science and Engineering and Professor of Physics
BioPersis Drell, Provost
Drell is a physicist who has served on the Stanford faculty since 2002. She is the James and Anna Marie Spilker Professor in the School of Engineering, a professor of materials science and engineering, and a professor of physics. She is the former dean of the Stanford School of Engineering and the former director of the U.S. Department of Energy’s SLAC National Accelerator Laboratory at Stanford.
Drell received her bachelor’s degree in mathematics and physics from Wellesley College in 1977, followed by a PhD in atomic physics from the University of California, Berkeley, in 1983. She then switched to high-energy experimental physics and worked as a postdoctoral scientist at the Lawrence Berkeley National Laboratory. She joined the physics faculty at Cornell University in 1988.
In 2002, Drell joined the Stanford faculty as a professor and director of research at SLAC. In her early years at SLAC, she worked on the construction of the Fermi Gamma-ray Space Telescope. In 2005, she became SLAC’s deputy director and was named director two years later. She led the 1,600-employee SLAC National Accelerator Laboratory until 2012. Drell is credited with helping broaden the focus of the laboratory, increasing collaborations between SLAC and the main Stanford campus, and overseeing transformational projects.
During Drell’s tenure as director, SLAC transitioned from being a laboratory dedicated primarily to research in high-energy physics to one that is now seen as a leader in a number of scientific disciplines. In 2010, the laboratory began operations of the Linac Coherent Light Source (LCLS). LCLS is the world’s most powerful X-ray free electron laser, which is revolutionizing study of the atomic and molecular world. LCLS is used to conduct scientific research and drive applications in energy and environmental sciences, drug development, and materials engineering.
After serving as the director of SLAC, Drell returned to the Stanford faculty, focusing her research on technology development for free electron lasers and particle astrophysics. Drell was named the dean of the Stanford School of Engineering in 2014.
As dean of the School of Engineering, Drell catalyzed a collaborative school-wide process, known as the SoE-Future process, to explore the realms of possibility for the future of the School of Engineering and engineering education and research. The process engaged a broad group of stakeholders to ask in what areas the School of Engineering could make significant world-changing impact, and how the school should be configured to address the major opportunities and challenges of the future.
The process resulted in a set of 10 broad aspirational questions to inspire thought on the school’s potential impact in the next 20 years. The process also resulted in a series of actionable recommendations across three areas – research, education, and culture. Drell’s approach to leading change emphasized the importance of creating conditions to optimize the probability of success.
As dean, Drell placed an emphasis on diversity and inclusion. She focused on increasing the participation of women and underrepresented minorities in engineering. She also sought to ensure a welcoming and inclusive environment for students of all backgrounds in the school.
In addition to her administrative responsibilities, Drell teaches a winter-quarter companion course to introductory physics each year for undergraduate students who had limited exposure to the subject in high school.
Drell is a member of the National Academy of Sciences and the American Academy of Arts and Sciences, and is a fellow of the American Physical Society. She has been the recipient of a Guggenheim Fellowship and a National Science Foundation Presidential Young Investigator Award.
Justin Du Bois
Henry Dreyfus Professor in Chemistry and Professor, by courtesy, of Chemical and Systems Biology
BioResearch and Scholarship
Research in the Du Bois laboratory spans reaction methods development, natural product synthesis, and chemical biology, and draws on expertise in molecular design, molecular recognition, and physical organic chemistry. An outstanding goal of our program has been to develop C–H bond functionalization processes as general methods for organic chemistry, and to demonstrate how such tools can impact the logic of chemical synthesis. A second area of interest focuses on the role of ion channels in electrical conduction and the specific involvement of channel subtypes in the sensation of pain. This work is enabled in part through the advent of small molecule modulators of channel function.
The Du Bois group has described new tactics for the selective conversion of saturated C–H to C–N and C–O bonds. These methods have general utility in synthesis, making possible the single-step incorporation of nitrogen and oxygen functional groups and thus simplifying the process of assembling complex molecules. To date, lab members have employed these versatile oxidation technologies to prepare natural products that include manzacidin A and C, agelastatin, tetrodotoxin, and saxitoxin. Detailed mechanistic studies of metal-catalyzed C–H functionalization reactions are performed in parallel with process development and chemical synthesis. These efforts ultimately give way to advances in catalyst design. A long-standing goal of this program is to identify robust catalyst systems that afford absolute control of reaction selectivity.
In a second program area, the Du Bois group is exploring voltage-gated ion channel structure and function using the tools of chemistry in combination with those of molecular biology, electrophysiology, microscopy and mass spectrometry. Much of this work has focused on studies of eukaryotic Na and Cl ion channels. The Du Bois lab is interested in understanding the biochemical mechanisms that underlie channel subtype regulation and how such processes may be altered following nerve injury. Small molecule toxins serve as lead compounds for the design of isoform-selective channel modulators, affinity reagents, and fluorescence imaging probes. Access to toxins and modified forms thereof (including saxitoxin, gonyautoxin, batrachotoxin, and veratridine) through de novo synthesis drives studies to elucidate toxin-receptor interactions and to develop new pharmacologic tools to study ion channel function in primary cells and murine pain models.
Assistant Professor of Statistics and of Electrical Engineering
Current Research and Scholarly InterestsMy work spans statistical learning, optimization, information theory, and computation, with a few driving goals: 1. To discover statistical learning procedures that optimally trade between real-world resources while maintaining statistical efficiency. 2. To build efficient large-scale optimization methods that move beyond bespoke solutions to methods that robustly work. 3. To develop tools to assess and guarantee the validity of---and confidence we should have in---machine-learned systems.
Maria Theresa Dulay
Senior Research Scientist, Basic Life
Senior Research Scientist, Basic Life, Rad/Molecular Imaging Program at Stanford
BioReceived PhD from University of Texas at Austin, Department of Chemistry with Marye Anne Fox
NIH Postdoctoral Fellow at Stanford University in Richard N. Zare's research lab, Department of Chemistry
Max H. Stein Professor and Professor of Statistics and of Biomedical Data Science
Current Research and Scholarly InterestsResearch Interests:
Bing Professor of Population Studies, Emeritus
Current Research and Scholarly InterestsThe role of the social sciences in dealing with global change
BioI am a lecturer at Stanford University’s Hopkins Marine Station, where I teach courses in kelp forest ecology, statistics, and scientific computing. In general, I study drivers of spatial and temporal change in marine ecosystems. Ongoing and recent projects include:
-examining the consequences of fisheries closures on fisher behavior
-understanding why some coral reefs fare better than their neighbors
-biodiversity and body size change, particularly in the context of recent human impacts
David Mulvane Ehrsam and Edward Curtis Franklin Professor in Chemistry
BioMy research group studies complex molecular systems by using ultrafast multi-dimensional infrared and non-linear UV/Vis methods. A basic theme is to understand the role of mesoscopic structure on the properties of molecular systems. Many systems have structure on length scales large compare to molecules but small compared to macroscopic dimensions. The mesoscopic structures occur on distance scales of a few nanometers to a few tens of nanometers. The properties of systems, such as water in nanoscopic environments, room temperature ionic liquids, functionalized surfaces, liquid crystals, metal organic frameworks, water and other liquids in nanoporous silica, polyelectrolyte fuel cell membranes, vesicles, and micelles depend on molecular level dynamics and intermolecular interactions. Our ultrafast measurements provide direct observables for understanding the relationships among dynamics, structure, and intermolecular interactions.
Bulk properties are frequently a very poor guide to understanding the molecular level details that determine the nature of a chemical process and its dynamics. Because molecules are small, molecular motions are inherently very fast. Recent advances in methodology developed in our labs make it possible for us to observe important processes as they occur. These measurements act like stop-action photography. To focus on a particular aspect of a time evolving system, we employ sequences of ultrashort pulses of light as the basis for non-linear methods such as ultrafast infrared two dimensional vibrational echoes, optical Kerr effect methods, and ultrafast IR transient absorption experiments.
We are using ultrafast 2D IR vibrational echo spectroscopy and other multi-dimensional IR methods, which we have pioneered, to study dynamics of molecular complexes, water confined on nm lengths scales with a variety of topographies, molecules bound to surfaces, ionic liquids, and materials such as metal organic frameworks and porous silica. We can probe the dynamic structures these systems. The methods are somewhat akin to multidimensional NMR, but they probe molecular structural evolution in real time on the relevant fast time scales, eight to ten orders of magnitude faster than NMR. We are obtaining direct information on how nanoscopic confinement of water changes its properties, a topic of great importance in chemistry, biology, geology, and materials. For the first time, we are observing the motions of molecular bound to surfaces. In biological membranes, we are using the vibrational echo methods to study dynamics and the relationship among dynamics, structure, and function. We are also developing and applying theory to these problems frequently in collaboration with top theoreticians.
We are studying dynamics in complex liquids, in particular room temperature ionic liquids, liquid crystals, supercooled liquids, as well as in influence of small quantities of water on liquid dynamics. Using ultrafast optical heterodyne detected optical Kerr effect methods, we can follow processes from tens of femtoseconds to ten microseconds. Our ability to look over such a wide range of time scales is unprecedented. The change in molecular dynamics when a system undergoes a phase change is of fundamental and practical importance. We are developing detailed theory as the companion to the experiments.
We are studying photo-induced proton transfer in nanoscopic water environments such as polyelectrolyte fuel cell membranes, using ultrafast UV/Vis fluorescence and multidimensional IR measurements to understand the proton transfer and other processes and how they are influenced by nanoscopic confinement. We want to understand the role of the solvent and the systems topology on proton transfer dynamics.
Benjamin Ezekiel Feldman
Assistant Professor of Physics
Current Research and Scholarly InterestsHow do material properties change as a result of interactions among electrons, and what is the nature of the new phases that result? What novel physical phenomena and functionality (e.g., symmetry breaking or topological excitations) can be realized by combining materials and device elements to produce emergent behavior? How can we leverage nontraditional measurement techniques to gain new insight into quantum materials? These are some of the overarching questions we seek to address in our research.
We are interested in a variety of quantum systems, especially those composed of two-dimensional flakes and heterostructures. This class of materials has been shown to exhibit an incredible variability in their properties, with the further benefit that they are highly tunable through gating and applied fields.
Assistant Professor of Biology
Current Research and Scholarly InterestsWe are interested in understanding design principles within cells that contribute to the diversification of cellular form and function. Using a combination of genetic, biochemical, and live imaging approaches, we are investigating how the microtubule cytoskeleton is spatially organized and the mechanisms underlying organizational changes during development.
Burnet C. and Mildred Finley Wohlford Professor in the School of Humanities and Sciences
Current Research and Scholarly InterestsHuman genetic and cultural evolution, mathematical biology, demography of China
Russell D. Fernald
Benjamin Scott Crocker Professor of Human Biology, Emeritus
Current Research and Scholarly InterestsIn the course of evolution,two of the strongest selective forces in nature,light and sex, have left their mark on living organisms. I am interested in how the development and function of the nervous system reflects these events. We use the reproductive system to understand how social behavior influences the main system of reproductive action controlled by a collection of cells in the brain containing gonodotropin releasing hormone(GnRH)
Melvin and Joan Lane Professor for Interdisciplinary Environmental Studies, Director, Woods Institute for the Environment, Professor of Earth System Science, of Biology and Senior Fellow at the Precourt Institute for Energy
Current Research and Scholarly InterestsResearch
My field is climate-change science, and my research emphasizes human-ecological interactions across many disciplines. Most studies include aspects of ecology, but also aspects of law, sociology, medicine, or engineering.
David Starr Jordan Professor
Current Research and Scholarly InterestsEvolutionary & ecological dynamics & diversity, microbial, expt'l, & cancer
Director, Geballe Laboratory for Advanced Materials, Professor of Applied Physics and, by courtesy, of Materials Science and Engineering
Current Research and Scholarly InterestsOur research focuses on the study of quantum materials with unconventional magnetic & electronic ground states & phase transitions. Emphasis on design and discovery of new materials. Recent focus on use of strain as a probe of, and tuning parameter for, a variety of electronic states. Interests include unconventional superconductivity, quantum phase transitions, nematicity, multipolar order, instabilities of low-dimensional materials and quantum magnetism.
Current Research and Scholarly InterestsStanford University Research areas center on optimal control methods to improve energy
efficiency and resource allocation in plug-in hybrid vehicles. Stanford graduate courses
taught in laboratory techniques and electronic instrumentation. Undergraduate course
"Energy Choices for the 21st Century"
Associate Professor of Biology
Current Research and Scholarly InterestsWe study the evolution of complex traits by developing new experimental and computational methods.
Our work brings together quantitative genetics, genomics, epigenetics, and evolutionary biology to achieve a deeper understanding of how genetic variation shapes the phenotypic diversity of life. Our main focus is on the evolution of gene expression, which is the primary fuel for natural selection. Our long-term goal is to be able to introduce complex traits into new species via genome editing.
Donald Kennedy Chair in the School of Humanities and Sciences and Professor of Genetics
Current Research and Scholarly InterestsThe long term goal of our research is to understand how proteins fold in living cells. My lab uses a multidisciplinary approach to address fundamental questions about molecular chaperones, protein folding and degradation. In addition to basic mechanistic principles, we aim to define how impairment of cellular folding and quality control are linked to disease, including cancer and neurodegenerative diseases and examine whether reengineering chaperone networks can provide therapeutic strategies.
Professor of Biology
Current Research and Scholarly InterestsEcological and evolutionary community assembly, with emphasis on understanding historical contingency in community structure, ecosystem functioning, biological invasion and ecological restoration, using experimental, theoretical, and comparative methods involving bacteria, protists, fungi, plants, and animals.