Education & Certifications


  • M.Sc., University of Michigan, Ecology and Evolutionary Biology (2015)
  • B.S., University of Arizona, Biology (2013)

Lab Affiliations


All Publications


  • Recent evolutionary history of tigers highlights contrasting roles of genetic drift and selection. Molecular biology and evolution Armstrong, E. E., Khan, A. n., Taylor, R. W., Gouy, A. n., Greenbaum, G. n., Thiéry, A. n., Kang, J. T., Redondo, S. A., Prost, S. n., Barsh, G. n., Kaelin, C. n., Phalke, S. n., Chugani, A. n., Gilbert, M. n., Miquelle, D. n., Zachariah, A. n., Borthakur, U. n., Reddy, A. n., Louis, E. n., Ryder, O. A., Jhala, Y. V., Petrov, D. n., Excoffier, L. n., Hadly, E. n., Ramakrishnan, U. n. 2021

    Abstract

    Species conservation can be improved by knowledge of evolutionary and genetic history. Tigers are among the most charismatic of endangered species and garner significant conservation attention. However, their evolutionary history and genomic variation remains poorly known, especially for Indian tigers. With 70% of the worlds wild tigers living in India, such knowledge is critical. We re-sequenced 65 individual tiger genomes representing most extant subspecies with a specific focus on tigers from India. As suggested by earlier studies, we found strong genetic differentiation between the putative tiger subspecies. Despite high total genomic diversity in India, individual tigers host longer runs of homozygosity, potentially suggesting recent inbreeding or founding events, possibly due to small and fragmented protected areas. We suggest the impacts of ongoing connectivity loss on inbreeding and persistence of Indian tigers be closely monitored. Surprisingly, demographic models suggest recent divergence (within the last 20,000 years) between subspecies, and strong population bottlenecks. Amur tiger genomes revealed the strongest signals of selection related to metabolic adaptation to cold, while Sumatran tigers show evidence of weak selection for genes involved in body size regulation. We recommend detailed investigation of local adaptation in Amur and Sumatran tigers prior to initiating genetic rescue.

    View details for DOI 10.1093/molbev/msab032

    View details for PubMedID 33592092

  • Pandemics' historical role in creating inequality. Science (New York, N.Y.) Dávalos, L. M., Austin, R. M., Balisi, M. A., Begay, R. L., Hofman, C. A., Kemp, M. E., Lund, J. R., Monroe, C. n., Mychajliw, A. M., Nelson, E. A., Nieves-Colón, M. A., Redondo, S. A., Sabin, S. n., Tsosie, K. S., Yracheta, J. M. 2020; 368 (6497): 1322–23

    View details for DOI 10.1126/science.abc8953

    View details for PubMedID 32554588

  • Can captive populations function as sources of genetic variation for reintroductions into the wild? A case study of the Arabian oryx from the Phoenix Zoo and the Shaumari Wildlife Reserve, Jordan CONSERVATION GENETICS Ochoa, A., Wells, S. A., West, G., Al-Smadi, M., Redondo, S. A., Sexton, S. R., Culver, M. 2016; 17 (5): 1145-1155