All Publications

  • Functional interactions among neurons within single columns of macaque V1. eLife Trepka, E. B., Zhu, S., Xia, R., Chen, X., Moore, T. 2022; 11


    Recent developments in high-density neurophysiological tools now make it possible to record from hundreds of single neurons within local, highly interconnected neural networks. Among the many advantages of such recordings is that they dramatically increase the quantity of identifiable, functional interactions between neurons thereby providing an unprecedented view of local circuits. Using high-density, Neuropixels recordings from single neocortical columns of primary visual cortex in nonhuman primates, we identified 1000s of functionally interacting neuronal pairs using established crosscorrelation approaches. Our results reveal clear and systematic variations in the synchrony and strength of functional interactions within single cortical columns. Despite neurons residing within the same column, both measures of interactions depended heavily on the vertical distance separating neuronal pairs, as well as on the similarity of stimulus tuning. In addition, we leveraged the statistical power afforded by the large numbers of functionally interacting pairs to categorize interactions between neurons based on their crosscorrelation functions. These analyses identified distinct, putative classes of functional interactions within the full population. These classes of functional interactions were corroborated by their unique distributions across defined laminar compartments and were consistent with known properties of V1 cortical circuitry, such as the lead-lag relationship between simple and complex cells. Our results provide a clear proof-of-principle for the use of high-density neurophysiological recordings to assess circuit-level interactions within local neuronal networks.

    View details for DOI 10.7554/eLife.79322

    View details for PubMedID 36321687

  • Entropy-based metrics for predicting choice behavior based on local response to reward NATURE COMMUNICATIONS Trepka, E., Spitmaan, M., Bari, B. A., Costa, V. D., Cohen, J. Y., Soltani, A. 2021; 12 (1): 6567


    For decades, behavioral scientists have used the matching law to quantify how animals distribute their choices between multiple options in response to reinforcement they receive. More recently, many reinforcement learning (RL) models have been developed to explain choice by integrating reward feedback over time. Despite reasonable success of RL models in capturing choice on a trial-by-trial basis, these models cannot capture variability in matching behavior. To address this, we developed metrics based on information theory and applied them to choice data from dynamic learning tasks in mice and monkeys. We found that a single entropy-based metric can explain 50% and 41% of variance in matching in mice and monkeys, respectively. We then used limitations of existing RL models in capturing entropy-based metrics to construct more accurate models of choice. Together, our entropy-based metrics provide a model-free tool to predict adaptive choice behavior and reveal underlying neural mechanisms.

    View details for DOI 10.1038/s41467-021-26784-w

    View details for Web of Science ID 000718060500032

    View details for PubMedID 34772943

    View details for PubMedCentralID PMC8590026