J. Moldowan
Professor (Research) of Geological and Environmental Sciences, Emeritus
Earth & Planetary Sciences
Administrative Appointments
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Post Doctoral Fellow, Department of Chemistry, Stanford University (1972 - 1972)
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Post Doctoral Associate, The University of Michigan (1972 - 1974)
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Research Chemist, Chevron Oil Field Research Company, Richmond, California (1974 - 1980)
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Senior Research Chemist, Chevron Old Field Research Co. (1980 - 1985)
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Senior Research Associate, Chevron Oil Field Research Co. (1985 - 1986)
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Group Leader, Biomarker Group, Chevron Oil Field Research Co. (1986 - 1991)
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Section Supervisor, Biomarker Group, Chevron Oil Field Research Co. (1991 - 1993)
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Professor (Research), Department of Geological & Environmental Sciences, Stanford University (1993 - Present)
Honors & Awards
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Undergrad Research Award, National Science Foundation (1968)
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Postdoctoral Fellowship, National Institutes of Health (1972)
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Best Paper Published in Organic Chemistry, Organic Geochemistry Division, Geological Society of America (1979)
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Best Paper Published in Organic Chemistry, Organic Geochemistry Division, Geological Society of America (1990)
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Recognition Award, Chevron Oil Field Research Co. (1990)
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Recognition Award, Chevron Oil Field Research Co. (1991)
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Co-author ot top award winning student paper, AAPG National Meeting (1997)
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Geochemical Fellow, The Geochemical Society & the European Association of Geochemistry (2011)
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Recipient of the Alfred Treibs Medal for career accomplishments in organic geochemistry, Orgainc Geochemistry Division of the Geochemical Society (2011)
Boards, Advisory Committees, Professional Organizations
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Invited speaker, AAPG National Meeting, Denver, CO, June 1-3. (2015 - 2015)
Professional Education
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Ph.D., The University of Michigan, Chemistry (1972)
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B.S., Wayne State University, Chemistry (1968)
Current Research and Scholarly Interests
Research
The history of life on Earth can be studied in the fossil record and in the chemical fossil record. In our research we study molecular fossils, biomarkers that can provide evolutionary and paleoenvironmental information from the organic component of sediments and petroleum. Current research foci include correlating fossil and molecular fossil records, understanding paleoenvironments and global change, determining the degree of thermal evolution of organic matter, and understanding petroleum biodegradation mechanisms. Our interests also lie in applications of organic geochemistry to understanding sedimentary basins, petroleum systems and reservoir architecture, and to environmental problems related to petroleum.
Teaching
I teach courses related to the subject matter of my research. The technology and its application in aspects of petroleum exploration and production, environmental analysis. Petroleum Geochemistry in Environmental and Earth Science. For those students interested in applying molecular geochemistry in their thesis research I teach a follow-up course called Laboratory Methods in Organic Geochemistry. Courses are taught in our facilities in Rohnert Park, CA, or on-site as appropriate.
Professional Activities
I am currently CEO and President of Biomarker Technologies, Inc., a research and services laboratory dedicated to application of advanced geochemical technologies for paterolrum exploration, development and production and for environmental and remediation monitoring.
All Publications
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Underutilized advanced geochemical technologies for oil and gas exploration and production-1. The diamondoids
JOURNAL OF PETROLEUM SCIENCE AND ENGINEERING
2015; 126: 87-96
View details for DOI 10.1016/j.petrol.2014.11.010
View details for Web of Science ID 000351255400012
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Stereochemistry, elution order and molecular modeling of four diaergostanes in petroleum
ORGANIC GEOCHEMISTRY
2014; 76: 1-8
View details for DOI 10.1016/j.orggeochem.2014.07.008
View details for Web of Science ID 000343813800001
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Cracking, mixing, and geochemical correlation of crude oils, North Slope, Alaska
AAPG BULLETIN
2014; 98 (6): 1235-1267
View details for DOI 10.1306/01081412197
View details for Web of Science ID 000337203800008
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The Western Desert versus Nile Delta: A comparative molecular biomarker study
MARINE AND PETROLEUM GEOLOGY
2013; 46: 319-334
View details for DOI 10.1016/j.marpetgeo.2013.07.003
View details for Web of Science ID 000324223400020
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Diamondoids as Indicators of Thermal Evolution and Natural Cracking of Oils From the Western Desert and the Nile DeltaEgypt
PETROLEUM SCIENCE AND TECHNOLOGY
2013; 31 (7): 702-711
View details for DOI 10.1080/10916466.2011.654305
View details for Web of Science ID 000315158200005
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Application of biological markers in the recognition of the geochemical characteristics of some crude oils from Abu Gharadig Basin, north Western Desert-Egypt
MARINE AND PETROLEUM GEOLOGY
2012; 35 (1): 28-40
View details for DOI 10.1016/j.marpetgeo.2012.03.001
View details for Web of Science ID 000305917500003
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Oil families and their inferred source rocks in the Barents Sea and northern Timan-Pechora Basin, Russia
AAPG BULLETIN
2012; 96 (6): 1121-1146
View details for DOI 10.1306/10181111043
View details for Web of Science ID 000304844700008
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The sulfur-isotopic compositions of benzothiophenes and dibenzothiophenes as a proxy for thermochemical sulfate reduction
GEOCHIMICA ET COSMOCHIMICA ACTA
2012; 84: 152-164
View details for DOI 10.1016/j.gca.2012.01.023
View details for Web of Science ID 000302770000011
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Thiadiamondoids as proxies for the extent of thermochemical sulfate reduction
ORGANIC GEOCHEMISTRY
2012; 44: 53-70
View details for DOI 10.1016/j.orggeochem.2011.11.008
View details for Web of Science ID 000301706100006
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New triaromatic steroids distinguish Paleozoic from Mesozoic oil
ORGANIC GEOCHEMISTRY
2011; 42 (4): 409-424
View details for DOI 10.1016/j.orggeochem.2011.02.007
View details for Web of Science ID 000291967900010
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Synthesis of Higher Diamondoids and Implications for Their Formation in Petroleum
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
2010; 49 (51): 9881-9885
View details for DOI 10.1002/anie.201004276
View details for Web of Science ID 000285392200017
View details for PubMedID 21110358
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Occurrence and biomarker potential of 23-methyl steroids in diatoms and sediments
ORGANIC GEOCHEMISTRY
2009; 40 (2): 219-228
View details for DOI 10.1016/j.orggeochem.2008.10.006
View details for Web of Science ID 000263950600009
- History of life from the hydrocarbon fossil record Handbook of Hydrocarbon microbiology: microbial interactions with hydrocarbons, oils, fats and related hydrophobic substrates and products edited by Timmis, K. N. 2009
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Molecular biosignatures
SPACE SCIENCE REVIEWS
2008; 135 (1-4): 133-159
View details for DOI 10.1007/s11214-007-9256-5
View details for Web of Science ID 000257384100011
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Origins of thiadiamondoids and diamondoidthiols in petroleum
ENERGY & FUELS
2007; 21 (6): 3431-3436
View details for DOI 10.1021/ef'7003333
View details for Web of Science ID 000251164900056
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Organic geochemistry of oil and source rock strata of the Ordos Basin, north-central China
AAPG BULLETIN
2007; 91 (9): 1273-1293
View details for DOI 10.1306/05040704131
View details for Web of Science ID 000249639800004
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Diamondoid hydrocarbons as a molecular proxy for thermal maturity and oil cracking: Geochemical models from hydrous pyrolysis
ORGANIC GEOCHEMISTRY
2007; 38 (2): 227-249
View details for DOI 10.1016/j.orggeochem.2006.09.011
View details for Web of Science ID 000244599600005
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The abundance and distribution of diamondoids in biodegraded oils from the San Joaquin Valley: Implications for biodegradation of diamondoids in petroleum reservoirs
ORGANIC GEOCHEMISTRY
2007; 38 (11): 1910-1926
View details for DOI 10.1016/j.orggeochem.2007.07.009
View details for Web of Science ID 000251446500009
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The fate of diamondoids in coals and sedimentary rocks
GEOLOGY
2006; 34 (12): 1013-1016
View details for Web of Science ID 000242630000006
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Biogeochemical evidence for the presence of the angiosperm molecular fossil oleanane in Paleozoic and Mesozoic non-angiospermous fossils
PALEOBIOLOGY
2006; 32 (2): 179-190
View details for Web of Science ID 000237104400002
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The catalytic effects of minerals on the formation of diamondoids from kerogen macromolecules
ORGANIC GEOCHEMISTRY
2006; 37 (11): 1421-1436
View details for DOI 10.1016/j.orggeochem.2006.07.006
View details for Web of Science ID 000242736400001
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Diamondoids and molecular biomarkers generated from modern sediments in the absence and presence of minerals during hydrous pyrolysis
ORGANIC GEOCHEMISTRY
2006; 37 (8): 891-911
View details for DOI 10.1016/j.orggeochem.2006.04.008
View details for Web of Science ID 000239821500003
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Geochemical characteristics of oil and source rocks and implications for petroleum systems, Talara basin, northwest Peru
AAPG BULLETIN
2005; 89 (11): 1519-1545
View details for DOI 10.1306/06300504094
View details for Web of Science ID 000233033000007
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Molecular records of northern California vegetation change
15th Annual V M Goldschmidt Conference
PERGAMON-ELSEVIER SCIENCE LTD. 2005: A348–A348
View details for Web of Science ID 000229399701085
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Pronounced occurrence of long-chain alkenones and dinosterol in a 25,000-year lipid molecular fossil record from Lake Titicaca, South America
GEOCHIMICA ET COSMOCHIMICA ACTA
2005; 69 (3): 623-636
View details for DOI 10.1016/j.gca.2004.07.004
View details for Web of Science ID 000226680300009
- The Biomarker Guide, 2nd Edition. I. Biomarkers and Isotopes in the Environment and Human History Cambridge University Press, 471 pages. 2005
- The Biomarker Guide, 2nd Edition. II. Biomarkers and Isotopes in Petroleum Exploration and Earth History Cambridge University Press, Cambridge, 679 pp.. 2005
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The rise of the rhizosolenid diatoms
SCIENCE
2004; 304 (5670): 584-587
Abstract
The 18S ribosomal DNA molecular phylogeny and lipid composition of over 120 marine diatoms showed that the capability to biosynthesize highly branched isoprenoid (HBI) alkenes is restricted to two specific phylogenetic clusters, which independently evolved in centric and pennate diatoms. The molecular record of C25 HBI chemical fossils in a large suite of well-dated marine sediments and petroleum revealed that the older cluster, composed of rhizosolenid diatoms, evolved 91.5 +/- 1.5 million years ago (Upper Turonian), enabling an accurate dating of the pace of diatom evolution that is unprecedented. The rapid rise of the rhizosolenid diatoms probably resulted from a major reorganization of the nutrient budget in the mid-Cretaceous oceans, triggered by plate tectonics.
View details for Web of Science ID 000220975100048
View details for PubMedID 15105500
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Controls of oil family distribution and composition in nonmarine petroleum systems: A case study from the Turpan-Hami basin, northwestern China
AAPG BULLETIN
2004; 88 (4): 447-481
View details for Web of Science ID 000220760500004
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Geochemical characteristics and correlation of oil and nonmarine source rocks from Mongolia
AAPG BULLETIN
2003; 87 (5): 817-846
View details for Web of Science ID 000182773700006
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Isolation and structural proof of the large diamond molecule, cyclohexamantane (C26H30)
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
2003; 42 (18): 2040-2044
View details for DOI 10.1002/anie.200250794
View details for Web of Science ID 000183047100010
View details for PubMedID 12746817
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Umir Formation: Organic geochemical and stratigraphic assessment as cosource for Middle Magdalena basin oil, Colombia
AAPG BULLETIN
2002; 86 (12): 2069-2087
View details for Web of Science ID 000179806000004
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The abnormal distribution of the molecular fossils in the pre-Cambrian and Cambrian: its biological significance
SCIENCE IN CHINA SERIES D-EARTH SCIENCES
2002; 45 (3): 193-200
View details for Web of Science ID 000175470000001
- Biomarkers and biosignatures of fossil organic compounds Signs of Life, A Report Based on the April 2000 Workshop on Life Detection Techniques. The National Research Council of the National Academies, Space Studies Board 2002
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Upper Oligocene lacustrine source rocks and petroleum systems of the northern Qaidam basin, northwest China
AAPG BULLETIN
2001; 85 (4): 601-619
View details for Web of Science ID 000168287500003
- etroleum geochemistry applied to petroleum system investigation Petroleum Systems of South Atlantic Margins: AAPG Memoir 73 edited by Mello, M. R., Katz, B. J. 2001: 41–52
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Stereoselective biodegradation of tricyclic terpanes in heavy oils from the Bolivar Coastal Fields, Venezuela
ORGANIC GEOCHEMISTRY
2001; 32 (1): 181-191
View details for Web of Science ID 000166638000016
- Molecular fossils demonstrate Precambrian origin of dinoflagellates Ecology of the Cambrian Radiation edited by Zhuravlev, A., Riding, R. Columbia University Press. 2001
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Chemical signals for early evolution of major taxa: Biosignatures and taxon-specific biomarkers
INTERNATIONAL GEOLOGY REVIEW
2000; 42 (9): 805-812
View details for Web of Science ID 000089964600002
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Molecular organic geochemistry of the Tarim basin, northwest China
AAPG BULLETIN
2000; 84 (8): 1109-1128
View details for Web of Science ID 000088684900004
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Trails of life
CHEMISTRY IN BRITAIN
2000; 36 (8): 34-37
View details for Web of Science ID 000088744800061
- Biomarkers McGraw-Hill Yearbook of Science & Technology 2000: 36–39
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Affinities of Early Cambrian acritarchs studied by using microscopy, fluorescence flow cytometry and biomarkers
REVIEW OF PALAEOBOTANY AND PALYNOLOGY
2000; 108 (1-2): 37-53
View details for Web of Science ID 000085550300003
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Paleozoic oil-source rock correlations in the Tarim basin, NW China
ORGANIC GEOCHEMISTRY
2000; 31 (4): 273-286
View details for Web of Science ID 000087295500003
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Lower-middle Jurassic nonmarine source rocks and petroleum systems of the northern Qaidam basin, northwest China
AAPG BULLETIN
1999; 83 (12): 1980-2005
View details for Web of Science ID 000084003100005
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Diamondoid hydrocarbons as indicators of natural oil cracking
NATURE
1999; 399 (6731): 54-57
View details for Web of Science ID 000080172100052
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Distribution and characterization of C-31 sterane from cretaceous sediments and oils, Songliao Basin, China
CHINESE SCIENCE BULLETIN
1999; 44 (6): 560-563
View details for Web of Science ID 000080231200017
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Application of new diterpane biomarkers to source, biodegradation and mixing effects on Central Llanos Basin oils, Colombia
ORGANIC GEOCHEMISTRY
1999; 30 (7): 515-534
View details for Web of Science ID 000081839000004
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24-norcholestanes as age-sensitive molecular fossils
GEOLOGY
1998; 26 (9): 783-786
View details for Web of Science ID 000075740300004
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Biogeochemical evidence for dinoflagellate ancestors in the Early Cambrian
SCIENCE
1998; 281 (5380): 1168-1170
View details for Web of Science ID 000075531200045
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Application of 24-norcholestanes for constraining source age of petroleum
18th International Meeting on Organic Geochemistry
PERGAMON-ELSEVIER SCIENCE LTD. 1998: 1269–83
View details for Web of Science ID 000077995900021
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Selective biodegradation of extended hopanes to 25-norhopanes in petroleum reservoirs. Insights from molecular mechanics
Symposium on Biodegradation of Petroleum, at the American-Chemical-Society National Meeting
PERGAMON-ELSEVIER SCIENCE LTD. 1996: 765–83
View details for Web of Science ID A1996VY25100002
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The early Mesozoic radiation of dinoflagellates
PALEOBIOLOGY
1996; 22 (3): 329-338
View details for Web of Science ID A1996VK59700003
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Stereoselective biodegradation of hopane epimers to 25-norhopanes in petroleum.
AMER CHEMICAL SOC. 1996: 3-GEOC
View details for Web of Science ID A1996UA48202669
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Chemostratigraphic reconstruction of biofacies: Molecular evidence linking cyst-forming dinoflagellates with pre-Triassic ancestors
GEOLOGY
1996; 24 (2): 159-162
View details for Web of Science ID A1996TT58000016
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EXTENDED 3-BETA-ALKYL STERANES AND 3-ALKYL TRIAROMATIC STEROIDS IN CRUDE OILS AND ROCK EXTRACTS
GEOCHIMICA ET COSMOCHIMICA ACTA
1995; 59 (18): 3717-3729
View details for Web of Science ID A1995RX60700005
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STABILIZING THE BOAT CONFORMATION OF CYCLOHEXANE RINGS
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
1995; 117 (24): 6532-6534
View details for Web of Science ID A1995RE57500017
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A NOVEL MICROBIAL HYDROCARBON DEGRADATION PATHWAY REVEALED BY HOPANE DEMETHYLATION IN A PETROLEUM RESERVOIR
GEOCHIMICA ET COSMOCHIMICA ACTA
1995; 59 (9): 1891-1894
View details for Web of Science ID A1995RA71500019
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APPLICATION OF BIOLOGICAL MARKER TECHNOLOGY TO BIOREMEDIATION OF REFINERY BY-PRODUCTS
ENERGY & FUELS
1995; 9 (1): 155-162
View details for Web of Science ID A1995QD28100023
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SYNTHESIS OF BIOMARKERS IN FOSSIL-FUELS - C-23 AND C-24 DIASTEREOMERS OF (20R)-4,17-BETA,23,24-TETRAMETHYL-18,19-DINORCHOLESTA-1,3,5,7,9,11,13-HEPTAENE
JOURNAL OF ORGANIC CHEMISTRY
1994; 59 (26): 8203-8208
View details for Web of Science ID A1994QA49200043
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SOURCE-ROCK QUALITY DETERMINATION FROM OIL BIOMARKERS .1. A NEW GEOCHEMICAL TECHNIQUE
AAPG BULLETIN
1994; 78 (10): 1507-1526
View details for Web of Science ID A1994PK80900002
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SOURCE-ROCK QUALITY DETERMINATION FROM OIL BIOMARKERS .2. A CASE-STUDY USING TERTIARY-RESERVOIRED BEAUFORT SEA OILS
AAPG BULLETIN
1994; 78 (10): 1527-1540
View details for Web of Science ID A1994PK80900003
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THE MOLECULAR FOSSIL RECORD OF OLEANANE AND ITS RELATION TO ANGIOSPERMS
SCIENCE
1994; 265 (5173): 768-771
Abstract
Oleanane has been reported in Upper Cretaceous and Tertiary source rocks and their related oils and has been suggested as a marker for flowering plants. Correspondence of oleanane concentrations relative to the ubiquitous microbial marker 17alpha-hopane with angiosperm diversification (Neocomian to Miocene) suggests that oleanane concentrations in migrated petroleum can be used to identify the maximum age of unknown or unavailable source rock. Rare occurrences of pre-Cretaceous oleanane suggest either that a separate lineage leads to the angiosperms well before the Early Cretaceous or that other plant groups have the rarely expressed ability to synthesize oleanane precursors.
View details for Web of Science ID A1994PA37200029
View details for PubMedID 17736275
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MULTIPLE OIL FAMILIES IN THE WEST SIBERIAN BASIN
AAPG BULLETIN-AMERICAN ASSOCIATION OF PETROLEUM GEOLOGISTS
1994; 78 (6): 893-909
View details for Web of Science ID A1994NR11300003
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FUNCTIONALIZED BIOLOGICAL PRECURSORS OF TRICYCLIC TERPANES - INFORMATION FROM SULFUR-BOUND BIOMARKERS IN A PERMIAN TASMANITE
ORGANIC GEOCHEMISTRY
1994; 21 (5): 481-487
View details for Web of Science ID A1994NQ29100006
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DIVERSE APPLICATIONS OF PETROLEUM BIOMARKER MATURITY PARAMETERS
ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING
1994; 19 (2B): 273-298
View details for Web of Science ID A1994NW22600005
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SYNTHESIS OF BIOLOGICAL MARKERS IN FOSSIL-FUELS .8. H-1 AND C-13 NMR ANALYSIS OF C-23 AND C-24 DIASTEREOMERS OF 5-ALPHA-DINOSTERANE
MAGNETIC RESONANCE IN CHEMISTRY
1994; 32 (2): 101-106
View details for Web of Science ID A1994ND00500007
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Potential applications of high temperature gas chromatography to Middle Eastern petroleum exploration and production
Middle East Geoscience Conference (GEO 94)
GULF PETROLINK. 1994: 258–267
View details for Web of Science ID A1994BD67D00021
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SYNTHESIS OF BIOLOGICAL MARKERS IN FOSSIL-FUELS .7. SELECTED DIASTEREOMERS OF 4-ALPHA-METHYL-5-ALPHA-STIGMASTANE AND 5-ALPHA-DINOSTERANE
JOURNAL OF ORGANIC CHEMISTRY
1993; 58 (12): 3444-3454
View details for Web of Science ID A1993LF87300039
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STRUCTURE AND SIGNIFICANCE OF A NOVEL REARRANGED MONOAROMATIC STEROID HYDROCARBON IN PETROLEUM
GEOCHIMICA ET COSMOCHIMICA ACTA
1986; 50 (3): 343-351
View details for Web of Science ID A1986A660500002
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SENSITIVITY OF BIOMARKER PROPERTIES TO DEPOSITIONAL ENVIRONMENT AND OR SOURCE INPUT IN THE LOWER TOARCIAN OF SOUTHWEST GERMANY
ORGANIC GEOCHEMISTRY
1986; 10 (4-6): 915-926
View details for Web of Science ID A1986F439700029
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24XI-METHYLCHOLESTANE-3BETA,5ALPHA,6BETA,12BETA,25-PENTOL 25-MONOACETATE, A NOVEL POLYOXYGENATED MARINE STEROL
STEROIDS
1975; 26 (1): 107-128
Abstract
24xi--Methylcholestane-3beta, 5alpha, 6beta, 12beta, 25-pentol 25-monoacetate has been isolated from an Alyconarian and its structure was established in part through extensive high resolution mass spectral and nmr studies and partly through the nonidentity of one of its degradation products with 24xi-methylcholestane-3beta, 5alpha, 6beta, 12alpha-tetrol synthesized from deoxycholic acid.
View details for Web of Science ID A1975AQ11900008
View details for PubMedID 241138
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24-XI-METHYLCHOLESTANE-3-BETA, 5-ALPHA, 6-BETA, 25-TETROL 25-MONOACETATE - NOVEL POLYHYDROXYLATED STEROID FROM AN ALCYONARIAN
STEROIDS
1974; 24 (3): 387-398
View details for Web of Science ID A1974U266600011
View details for PubMedID 4153538