School of Medicine
Showing 1-6 of 6 Results
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Amir Bahmani
Instructor, Genetics
BioAmir Bahmani is a Genetics Instructor and Director of Stanford's Deep Data Research Center (https://deepdata.stanford.edu ) at the Stanford School of Medicine. He has worked on distributed and parallel computing applications since 2008. Amir is currently an active researcher in the VA Million Veteran Program (MVP), Human Tumor Atlas Network (HTAN), Human BioMolecular Atlas Program (HuBMAP), Stanford Metabolic Health Center (MHC), Integrated Personal Omics Profiling (iPOP), and Bridge to Artificial Intelligence (Bridge2AI).
His team has designed and developed several notable cloud-scale frameworks, including the Personal Health Dashboard (PHD), cloud-based cost-saving platforms such as Hummingbird and Swarm, and the MyPHD platform, which now has over 12,000 participants and hosts more than 37 studies. His team also created Stanford Data Ocean (SDO), an innovative platform for educating engineers and biologists. SDO is the first serverless multi-omics and wearables data platform used for education and training.
Since 2017, he has trained more than 30 graduate interns (engineers and designers) from outside the School of Medicine, engaging them in the field of medicine. His course has been offered to physicians, biologists, engineers, and designers, earning him recognition as the recipient of Stanford’s 2024 Walter J. Gores Award for Excellence in Teaching. In 2023, he received the Terman Mentorship Award for mentoring Terman Fellow Ryan Park (top 1%), who transitioned to a Genetics PhD program inspired by Amir’s course. Committed to accessibility in education, Amir created a first-of-its-kind scholarship for under-resourced communities at Stanford, providing his course free of charge—along with Genetics certificates—to over 4,500 students from under-resourced backgrounds across 104 countries and all 50 U.S. states. -
Julie Baker
Professor of Genetics
Current Research and Scholarly InterestsWe examine how cells communicate and function during fetal development. The work in my laboratory focuses on the establishment of specific cell fates using genomics to decipher interactions between chromatin and developmental signaling cascades, between genomes and rapidly evolving cell types, and between genomic copy number variation and gene expression. In recent years we have focused on the vastly understudied biology of the trophoblast lineage, particularly how this lineage evolved.
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Maria Barna
Associate Professor of Genetics
Current Research and Scholarly InterestsOur lab studies how intricate control of gene expression and cell signaling is regulated on a minute-by-minute basis to give rise to the remarkable diversity of cell types and tissue morphology that form the living blueprints of developing organisms. Work in the Barna lab is presently split into two main research efforts. The first is investigating ribosome-mediated control of gene expression genome-wide in space and time during cellular differentiation and organismal development. This research is opening a new field of study in which we apply sophisticated mass spectrometry, computational biology, genomics, and developmental genetics, to characterize a ribosome code to gene expression. Our research has shown that not all of the millions of ribosomes within a cell are the same and that ribosome heterogeneity can diversify how genomes are translated into proteomes. In particular, we seek to address whether fundamental aspects of gene regulation are controlled by ribosomes harboring a unique activity or composition that are tuned to translating specific transcripts by virtue of RNA regulatory elements embedded within their 5’UTRs. The second research effort is centered on employing state-of-the-art live cell imaging to visualize cell signaling and cellular control of organogenesis. This research has led to the realization of a novel means of cell-cell communication dependent on a dense network of actin-based cellular extension within developing organs that interconnect and facilitate the precise transmission of molecular information between cells. We apply and create bioengineering tools to manipulate such cellular interactions and signaling in-vivo.
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Greg Barsh
Professor of Genetics and of Pediatrics, Emeritus
Current Research and Scholarly InterestsGenetics of color variation
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Michael Bassik
Associate Professor of Genetics
Current Research and Scholarly InterestsWe are an interdisciplinary lab focused on two major areas:(1) we seek to understand mechanisms of cancer growth and drug resistance in order to find new therapeutic targets(2) we study mechanisms by which macrophages and other cells take up diverse materials by endocytosis and phagocytosis; these substrates range from bacteria, viruses, and cancer cells to drugs and protein toxins. To accomplish these goals, we develop and use new technologies for high-throughput functional genomics.
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Anne Brunet
Michele and Timothy Barakett Endowed Professor
Current Research and Scholarly InterestsOur lab studies the molecular basis of longevity. We are interested in the mechanism of action of known longevity genes, including FOXO and SIRT, in the mammalian nervous system. We are particularly interested in the role of these longevity genes in neural stem cells. We are also discovering novel genes and processes involved in aging using two short-lived model systems, the invertebrate C. elegans and an extremely short-lived vertebrate, the African killifish N. furzeri.
