School of Engineering
Showing 1-100 of 242 Results
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Punnag Padhy
Ph.D. Student in Electrical Engineering, admitted Summer 2016
Current Research and Scholarly InterestsCurrently, I am working on an on-chip platform to simultaneously trap and manipulate micron scale beads and droplets with an intention to implement chemical reactions on a chip at ultrasmall volumes.
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Andreas Paepcke
Sr. Research Engineer
BioDr. Andreas Paepcke is a Senior Research Scientist and Director for Data Analytics in support of online teaching efforts at Stanford University. His interests include user interfaces and systems for teaching and learning. He uses data analytics to create tools that benefit these online efforts. In the past Dr. Paepcke and his groups of students designed and implemented WebBase, an experimental storage and high speed dissemination system for Web content. Their work on small devices focused on novel methods for summarizing and transforming Web pages, and browsing images on small displays. Dr. Paepcke has served on numerous program committees, including a position as Vice Program Chair, heading the World-Wide Web Conference's 'Browsers and User Interfaces' program track, and as Program Chair for the Joint Conference on Digital Libraries 2008. He served on several National Science Foundation proposal evaluation panels and was co-founding associate editor of ACM Transactions on the Web. Dr. Paepcke received BS and MS degrees in applied mathematics from Harvard University, and a Ph.D. in Computer Science from the University of Karlsruhe, Germany. Previously, he worked as a researcher at Hewlett-Packard Laboratory, and as a research consultant at Xerox PARC. He has served on a number of technical advisory boards for startup companies.
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Julia Palacios
Assistant Professor of Statistics and of Biomedical Data Science
On Partial Leave from 09/01/2020 To 08/31/2021BioDr. Palacios seek to provide statistically rigorous answers to concrete, data driven questions in evolutionary genetics and public health . My research involves probabilistic modeling of evolutionary forces and the development of computationally tractable methods that are applicable to big data problems. Past and current research relies heavily on the theory of stochastic processes, Bayesian nonparametrics and recent developments in machine learning and statistical theory for big data.
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Daniel Palanker, PhD
Director of HEPL, Professor of Ophthalmology and, by courtesy, of Electrical Engineering
Current Research and Scholarly InterestsInteractions of electric field and light with biological cells and tissues and their applications to imaging, diagnostics, therapeutics and prosthetics, primarily in ophthalmology.
Specific fields of interest:
Electronic retinal prosthesis;
Electronic enhancement of tear secretion;
Electronic control of blood vessels;
Non-damaging retinal laser therapy;
Ultrafast laser surgery;
Interferometric imaging of neural signals;
Cell transplantation and retinal plasticity. -
Megan J. Palmer
Adjunct Professor, Executive Director of Bio Policy & Leadership Initiatives, Bioengineering
BioDr. Megan J. Palmer is the Executive Director of Bio Policy & Leadership Initiatives at Stanford University. In this role, Dr. Palmer leads integrated research, teaching and engagement programs to explore how biological science and engineering is shaping our societies, and to guide innovation to serve public interests. Based in the Department of Bioengineering, where she is also an Adjunct Professor, she works closely both with groups across the university and with stakeholders in academia, government, industry and civil society around the world.
In addition to fostering broader efforts, Dr. Palmer leads a focus area in biosecurity in partnership with the Freeman Spogli Institute for International Studies (FSI) at Stanford. Projects in this area examine how security is conceived and managed as biotechnology becomes increasingly accessible. Her current projects include assessing strategies for governing dual use research, analyzing the diffusion of safety and security norms and practices, and understanding the security implications of alternative technology design decisions.
Dr. Palmer has created and led many programs aimed at developing and promoting best practices and policies for the responsible development of bioengineering. For the last ten years she has led programs in safety, security and social responsibility for the international Genetically Engineered Machine (iGEM) competition, which last year involved over 6000 students in 353 teams from 48 countries. She also founded and serves as Executive Director of the Synthetic Biology Leadership Excellence Accelerator Program (LEAP), an international fellowship program in biotechnology leadership. She advises and works with many other organizations on their strategies for the responsible development of bioengineering, including serving on the board of directors of Revive & Restore, a nonprofit organization advancing biotechnologies for conservation.
Previously, Megan was a Senior Research Scholar and William J. Perry Fellow in International Security at the Center for International Security and Cooperation (CISAC), part of FSI, where she is now an affiliated researcher. She also spent five years as Deputy Director of Policy and Practices for the multi-university NSF Synthetic Biology Engineering Research Center (Synberc). She has previously held positions as a project scientist at the California Center for Quantitative Bioscience at the University of California Berkeley (where she was an affiliate of Lawrence Berkeley National Labs), and a postdoctoral scholar in the Bioengineering Department at Stanford University. Dr. Palmer received her Ph.D. in Biological Engineering from M.I.T. and a B.Sc.E. in Engineering Chemistry from Queen’s University, Canada. -
Vijay Pande
Adjunct Professor, Bioengineering
BioVijay Pande, Henry Dreyfus Professor of Chemistry and, by courtesy, of Structural Biology and Computer Science, also currently directs of the Stanford Program in Biophysics and the Folding@home Distribtued Computing project. His research centers on novel cloud computing simulation techniques to address problems in chemical biology. In particular, he has pioneered distributed computing methodology to break fundamental barriers in the simulation of protein and nucleic acid kinetics and thermodynamics. As director of the Folding@home project (http://folding.stanford.edu), Prof. Pande has, for the first time, directly simulated protein folding dynamics, making quantitative comparisons with experimental results, often considered a “holy grail” of computational biology. His current research also includes novel computational methods for drug design, especially in the area of protein misfolding and associated diseases such as Alzheimer’s and Huntington’s Disease.
Professor Pande studied physics at Princeton University (B.A. 1992), where he was first introduced to biophysical questions, especially in undergraduate research with Nobel Laureate P. Anderson. His doctoral research in physics under Profs. T. Tanaka and A. Grosberg at MIT (Ph.D. 1995) centered on statistical mechanical models of protein folding, suggesting new ways to design protein sequences for stability and folding properties. As a Miller Fellow under Prof. D. Rokhsar at UC Berkeley, Prof. Pande extended this methodology to examine atomistic protein models, laying the foundations for his work at Stanford University. Among numerous awards, Prof. Pande has received the Biophysical Society’s Bárány Award for Young Investigators and Protein Society’s Irving Sigal Young Investigator Award, and was named to MIT’s TR100 and elected a Fellow of the American Physical Society.
The Pande research group develops and applies new theoretical methods to understand the physical properties of biological molecules such as proteins, nucleic acids and lipid membranes, using this understanding to design synthetic systems including small-molecule therapeutics. In particular, the group examines the self-assembly properties of biomolecules. For example, how do protein and RNA molecules fold? How do proteins misfold and aggregate? How can we use this understanding to tackle misfolding related degeneration and develop small molecules to inhibit disease processes?
As these phenomena are complex, spanning molecular to mesoscopic lengths and nanosecond to millisecond timescales, the lab employs a variety of methods, including statistical mechanical analytic models, Markov State Models, and statistical and informatic methods. Other tools include Monte Carlo, Langevin dynamics, and molecular dynamics computer simulations on workstations and massively parallel supercomputers, superclusters, and worldwide distributed computing. The group has also done extensive work in the application of machine learning, pioneering traditional and deep learning approaches to cheminformatics, biophysics and drug design.
For example, simulations in all-atom detail on experimentally relevant timescales (milliseconds to seconds) have produced specific predictions of the structural and physical chemical nature of protein aggregation involved in Alzheimer’s and Huntington’s diseases. These results have fed into computational small molecule drug design methods, yielding interesting new chemical entities.
Since such problems are extremely computationally demanding, the group developed a distributed computing project for protein folding dynamics. Since its launch in October 2000, Folding@Home has attracted more than 4,000,000 PCs, and today is recognized as the most powerful supercluster in the world. Such enormous computational resources have allowed simulations of unprecedented folding timescales and statistical precision and accuracy. For more details, please visit http://pande.stanford.edu. -
Bradford Parkinson
Edward C. Wells Professor in the School of Engineering, Emeritus
BioProfessor Bradford Parkinson was the Chief Architect for GPS, and led the original advocacy for the system in 1973 as an Air Force Colonel. Gaining approval, he became the first Director of the GPS Joint Program Office and led the original development of spacecraft, Master Control Station and 8 types of User Equipment. He continued leadership of the Program through the extensive test validation Program, including being the Launch Commander for the first GPS satellite launches. This original deployment of GPS demonstrated comfortable margins against all PNT (Positioning, Navigation, and Timing) requirements.
Earlier in his career, he was a key developer of a modernized AC-130 Gunship, introduction of which included 160 hours of combat missions. He was an instructor at the USAF Test Pilot School. In addition he led the Department of Astronautics and Computer Science at the US Air Force Academy. He retired from the US Air Force as a Colonel.
He was appointed a Professor at Stanford University in 1984, after six years of experience in industry. At Stanford University, he led the development of many innovative applications of GPS, including:
1.Commercial aircraft (Boeing 737) blind landing using GPS alone,
2.Fully automatic GPS control of Farm Tractors on a rough field to an accuracy of 2 inches,
3.Pioneering the augmentation to GPS (WAAS) that allows any user to achieve accuracies of 2 feet and very high levels of integrity assurance.
He has been the CEO of two companies, and serves on many boards. He is the editor/author of the AIAA Award winning 2 Volumes: “GPS Theory and Applications” and is author or coauthor of over 80 technical papers.
Among his many awards is the Draper Prize of the National Academy of Engineering, considered by some to be the “Engineering Nobel”. -
Tetiana Parshakova
Ph.D. Student in Computational and Mathematical Engineering, admitted Autumn 2019
BioI am interested in developing novel learning algorithms using techniques from optimization and statistics along with theoretical guarantees for these methods.
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M Elisabeth Pate-Cornell
The Burton J. and DeeDee McMurtry Professor in the School of Engineering
BioDr. Marie-Elisabeth Paté-Cornell is the Burt and Deedee McMurtry Professor in the School of Engineering and Professor and Founding Chair (2000-2011) of the Department of Management Science and Engineering at Stanford University. Her specialty is engineering risk analysis with application to complex systems (space, medical, offshore oil platforms, etc.). Her earlier research has focused on the optimization of warning systems and the explicit inclusion of human and organizational factors in the analysis of systems’ failure risks. Her recent work is on the use of game theory in risk analysis with applications that have included counter-terrorism, nuclear counter-proliferation problems and cyber security. She is the author of more than one hundred publications, and the co-editor of a book on Perspectives on Complex Global Problems (2016).
She is a member of the National Academy of Engineering, of the French Académie des Technologies, of the NASA Advisory Council and of several boards including the Board of Advisors of the Naval Postgraduate School and the Navy War College. Dr. Paté-Cornell was a member of the President’s Foreign Intelligence Advisory Board from December 2001 to 2008, of the board of the Aerospace Corporation (2004-2013) of Draper Laboratory (2009-2016), and of InQtel (2006-2017). She holds a BS in Mathematics and Physics, Marseille (France), an Engineering degree (Applied Math/CS) from the Institut Polytechnique de Grenoble (France), an MS in Operations Research and a PhD in Engineering-Economic Systems, both from Stanford University.
She and her late husband, Dr. Allin Cornell had two children, Philip Cornell (born 1981) and Ariane Cornell (1984). She is married to Admiral James O. Ellis Jr. (US Navy, Ret.). -
Marco Patrignani
Visiting Asst Prof
Current Research and Scholarly InterestsFoundations of programming languages, PL security, secure compilation
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Arogyaswami Paulraj
Professor (Research) of Electrical Engineering, Emeritus
BioProfessor Emeritus Arogyaswami Paulraj, Stanford University, is a pioneer of MIMO wireless communications, a technology break through that enables improved wireless performance. MIMO is now incorporated into all new wireless systems.
Paulraj is the author of over 400 research papers, two textbooks, and a co-inventor in 80 US patents.
Paulraj has won over a dozen awards, notably the National Inventors Hall of Fame (USPTO), Marconi Prize and Fellowship, 2014 and the IEEE Alexander Graham Bell Medal, 2011. He is a fellow of eight scientific / engineering national academies including the US, China, India, and Sweden. He is a fellow of IEEE and AAAS.
In 1999, Paulraj founded Iospan Wireless Inc. - which developed and established MIMO-OFDMA wireless as the core 4G technology. Iospan was acquired by Intel Corporation in 2003. In 2004, he co-founded Beceem Communications Inc. The company became the market leader in 4G-WiMAX semiconductor and was acquired by Broadcom Corp. in 2010. In 2014 he founded Rasa Networks to develop Machine Learning tools for WiFi Networks. The company was acquired HPE in 2016.
During his 30 years in the Indian (Navy) (1961-1991), he founded three national-level laboratories in India and headed one of India’s most successful military R&D projects – APSOH sonar. He received over a dozen awards (many at the national level) in India including the Padma Bhushan, Ati Vishist Seva Medal and the VASVIK Medal. -
John M. Pauly
Reid Weaver Dennis Professor
BioInterests include medical imaging generally, and magnetic resonance imaging (MRI) in particular. Current efforts are focused on medical applications of MRI where real-time interactive imaging is important. Two examples are cardiac imaging, and the interactive guidance of interventional procedures. Specific interests include rapid methods for the excitation and acquisition of the MR signal, and the reconstruction of images from the data acquired using these approaches.
