School of Medicine
Showing 1-100 of 134 Results
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Shaimaa Bakr
Masters Student in Biomedical Data Science, admitted Autumn 2020
BioShaimaa is a graduate of the Ph.D. program, the Department of Electrical Engineering at Stanford and currently a postdoctoral researcher at the Gevaert lab at the Stanford Center for Biomedical Informatics Research (BMIR). Shaimaa is interested in developing multi-modal deep learning models using biomedical data with focus on genomic, radiology and histopathology data and applying these models to solve problems in cancer and other diseases. Prior to Stanford, she received her B.Sc. (Summa Cum Laude) from the American University in Cairo, where she studied Electronics Engineering and Computer Science. She obtained her MS degree in Electrical Engineering from Rensselaer Polytechnic Institute, working in the Cognitive and Immersive Systems lab, and advised by Professor Richard Radke.
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Corinne Beck
Program Manager, Center for Cancer Systems Biology (CCSB), Biomedical Data Science
Current Role at StanfordProgram Manager
Stanford Center for Cancer Systems Biology (CCSB)
Plevritis Lab
Department of Biomedical Data Science (DBDS)
School of Medicine | Stanford University -
Daniel Bloch
Professor (Research) of Biomedical Data Science (BDS), Emeritus
BioI received my PhD. in Mathematical Statistics in 1967. I joined the research community at the Stanford University School of Medicine, Division of Immunology & Rheumatology, in 1984 as head statistician directing the biostatistics consulting and analytic support of the Arthritis Rheumatism Aging Medical Information System (ARAMIS) and Multipurpose Arthritis Center (MAC) grant-related research programs. In 1993 I was appointed Associate Professor with a joint appointment in the Departments of Medicine and of Health Research & Policy, and am currently Professor of Biostatistics at Stanford University, emeritus since 2007. My contributions to the statistics literature span numerous fields, including methods of sample size estimation, efficiency and bias of estimators, research methods for kappa statistics, non-parametric classification methods and methods of assessing multi-parameter endpoints. I have over 200 peer-reviewed publications. I have been directly involved with the development of numerous criteria rules for classification of diseases and with establishing guidelines for clinical trial research and in proposing responder criteria for osteoarthritis drugs. Since 1987, I have been a consultant on an ad hoc basis to pharmaceutical and biotechnical firms, including both start-up and established companies. I have extensive experience with devices, drugs and biologics and have participated in all aspects of applying statistics to implement investigational plans; e.g.: for protocol development, design of trials, database design. I’ve been a member of the FDA Statistical Advisors Panel, the statistical member on numerous data safety monitoring boards, and frequently represent companies at meetings with the FDA
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Michelle Whirl-Carrillo
Principal Investigator and Director, PharmGKB, Biomedical Data Science
Current Role at StanfordPrincipal Investigator and Director, PharmGKB
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Francisco M. De La Vega
Adjunct Professor, Biomedical Data Science
BioFrancisco De La Vega is a distinguished geneticist and computational biologist, and an experienced technical executive, widely recognized for his expertise in clinical and population genomics, and bioinformatics. Currently serving as the Vice President of Hereditary Disease at Tempus Labs, Francisco is spearheading the development of comprehensive germline genetic tests and conducting innovative research into racial disparities in cancer leveraging Tempus’ multimodal Real-World Data. His work focuses on uncovering the connections between genetic ancestry and cancer genome mutational profiles that may help explain the differences in cancer incidence and outcomes across races and ethnicities. In addition to his role at Tempus Labs, Francisco is an Adjunct Professor in the Department of Biomedical Data Science at Stanford University School of Medicine and is a member of the Board of Directors of the International Society of Computational Biology, serving from 2022 to 2025.
Francisco teaches BIODS-235: "Best practices for developing data science software for clinical and healthcare applications" every Winter quarter. -
Li Gong
Scientific Data Curator 3, Biomedical Data Science
Current Role at StanfordI am a senior scientific curator at PharmGKB, and also serves as the program manager for the Stanford ClinGen team and coordinator for the ClinGen Pharmacogenomics Working Group.
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Ryunosuke (Ryan) Goto
Ph.D. Student in Biomedical Data Science, admitted Autumn 2024
BioRyunosuke (Ryan) Goto is a PhD student in Biomedical Data Science and a Knight-Hennessy Scholar. Prior to Stanford, Ryan was a Chief Resident in Pediatrics at Nagano Children's Hospital and the University of Tokyo Hospital. He is interested in developing and applying statistical tools to investigate human disease and advance precision medicine. Ryan’s work has been published in The Lancet, JAMA Pediatrics, and Pediatrics, among other journals.
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Alexander Ioannidis
Affiliate, Biomedical Data Science
Adjunct Professor, Institute for Computational and Mathematical Engineering (ICME)BioDr. Alexander Ioannidis is an Adjunct Professor in Computational and Mathematical Engineering, where he teaches machine learning and data science, and is a researcher in the Department of Biomedical Data Science at Stanford Medical School. He earned his Ph.D. from Stanford University in Computational and Mathematical Engineering together with an M.S. in Management Science and Engineering (Optimization). He graduated summa cum laude from Harvard University in Chemistry and Physics and earned an M.Phil at the University of Cambridge from the Department of Applied Math and Theoretical Physics in Computational Biology. His research focuses on the design of algorithms and application of computational methods for problems in genomics, clinical data science, and precision health with a particular focus on underrepresented populations in Oceania and Latin America.
*For John Ioannidis (no relation), see here, https://profiles.stanford.edu/john-ioannidis -
Asef Islam
Masters Student in Biomedical Data Science, admitted Winter 2023
Masters Student in Computer Science, admitted Autumn 2022Current Research and Scholarly InterestsAI in medicine and other fields, particularly ML and CV techniques
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Philip W. Lavori
Professor of Biomedical Data Science, Emeritus
Current Research and Scholarly InterestsBiostatistics, clinical trials, longitudinal studies, casual inference from observational studies, genetic tissue banking, informed consent. Trial designs for dynamic (adaptive) treatment regimes, psychiatric research, cancer.
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Sheng Liu
Postdoctoral Scholar, Biomedical Data Sciences
BioSheng Liu is a postdoctoral fellow at Stanford University. In May 2023, He received a Ph.D. degree from New York University, majoring in Data Science and Machine Learning. His background is in the area of robust and trustworthy machine learning, machine learning for healthcare.
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Pan Lu
Postdoctoral Scholar, Biomedical Data Sciences
Current Research and Scholarly InterestsMy research goal is to build machines that can reason and collaborate with humans for the common good. My primary research focuses on machine learning and NLP, particularly machine reasoning, mathematical reasoning, and scientific discovery:
1. Mathematical reasoning in multimodal and knowledge-intensive contexts
2. Tool-augmented large language models for planning, reasoning, and generation
3. Parameter-efficient fine-tuning for fondation models
4. AI for scientific reasoning and discovery -
Chase A. Ludwig, MD, MS
Assistant Professor of Ophthalmology (Research/Clinical Trials)
Masters Student in Biomedical Data Science, admitted Autumn 2023Current Research and Scholarly InterestsMy research at present focuses on better understanding high and pathologic myopia and their retina sequelae (retinal detachments, myopic traction maculopathy, myopic macular degeneration) through informatics and data-driven research. My goal is to make discoveries within the field of Ophthalmology that will impact the rest of medicine, taking advantage of our ready access to the only visible portion of the central nervous system.
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Matthew Lungren
Adjunct Professor, Biomedical Data Science
BioDr. Lungren is Chief Data Science Officer for Microsoft Health & Life Sciences where he focuses on translating cutting edge technology, including generative AI and cloud services, into innovative healthcare applications. As a physician and clinical machine learning researcher, he maintains a part-time clinical practice at UCSF while also continuing his research and teaching roles as adjunct professor at Stanford University.
Prior to joining Microsoft, Dr Lungren was a clinical interventional radiologist and research faculty at Stanford University Medical School where he led the Stanford Center for Artificial Intelligence in Medicine and Imaging (AIMI). He later served as Principal for Clinical AI/ML at Amazon Web Services in World Wide Public Sector Healthcare, focusing on business development for clinical machine learning technologies in the public cloud.
His scientific work has led to more than 150 publications, including work on multi-modal data fusion models for healthcare applications, new computer vision and natural language processing approaches for healthcare specific domains, opportunistic screening with machine learning for public health applications, open medical data as public good, prospective clinical trials for clinical AI translation, and application of generative AI in healthcare. He has served as advisor for early stage startups and large fortune-500 companies on healthcare AI technology development and go-to-market strategy. Dr. Lungren's work has been featured in national news outlets such as NPR, Vice News, Scientific American, and he regularly speaks at national and international scientific meetings on the topic of AI in healthcare.
Dr. Lungren is also a top rated instructor on Coursera where his AI in Healthcare course designed especially for learners with non-technical backgrounds has been completed by more than 20k students around the world - enrollment is open now: https://www.coursera.org/learn/fundamental-machine-learning-healthcare -
Akira Nishii
Masters Student in Biomedical Data Science, admitted Autumn 2024
Current Research and Scholarly InterestsI'm interested in the challenges that arise in healthcare and biomedicine when applying machine learning to data-scarce and safety-critical settings. This broad interest motivates me to work on topics surrounding self-supervised learning and synthetic data.
